BLASTX nr result

ID: Coptis24_contig00000049 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000049
         (956 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634163.1| PREDICTED: nascent polypeptide-associated co...   164   2e-38
gb|AFK39074.1| unknown [Lotus japonicus]                              162   8e-38
ref|XP_003526769.1| PREDICTED: nascent polypeptide-associated co...   161   2e-37
ref|XP_003523310.1| PREDICTED: nascent polypeptide-associated co...   161   2e-37
gb|ACU14200.1| unknown [Glycine max]                                  161   2e-37

>ref|XP_003634163.1| PREDICTED: nascent polypeptide-associated complex subunit
           alpha-like protein 2-like [Vitis vinifera]
           gi|302143993|emb|CBI23098.3| unnamed protein product
           [Vitis vinifera]
          Length = 210

 Score =  164 bits (416), Expect = 2e-38
 Identities = 93/139 (66%), Positives = 97/139 (69%), Gaps = 2/139 (1%)
 Frame = +3

Query: 267 AMLKLGMKSVTGVSRVTIKRTKNVLFAISKPDVFKSPNSDTYVIFGEAKIEDXXXXXXXX 446
           AMLKLGMK VTGV RVTIKRTKN+LF ISKPDVFKSPNS+TYVIFGEAKIED        
Sbjct: 72  AMLKLGMKPVTGVGRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIEDLSSQLQTQ 131

Query: 447 XXXXFRMPDMSSVMAKSD--XXXXXXXXXXXXXXXXXXXXXXRDIDLVMTQAGVSRGKAV 620
               FRMPDM SVMAKSD                        RDIDLVMTQAGVSR KAV
Sbjct: 132 AAQQFRMPDMGSVMAKSDISAAAAGTQADEEEEVIDETGVEPRDIDLVMTQAGVSRSKAV 191

Query: 621 KALKAHDGDIVSAIMEITT 677
           KALK H+GDIVSAIME+TT
Sbjct: 192 KALKTHNGDIVSAIMELTT 210


>gb|AFK39074.1| unknown [Lotus japonicus]
          Length = 227

 Score =  162 bits (411), Expect = 8e-38
 Identities = 91/138 (65%), Positives = 96/138 (69%), Gaps = 1/138 (0%)
 Frame = +3

Query: 267 AMLKLGMKSVTGVSRVTIKRTKNVLFAISKPDVFKSPNSDTYVIFGEAKIEDXXXXXXXX 446
           AMLKLG+K VTGVSRVTIKRTKN+LF ISKPDVFKSPNS+TYVIFGEAKIED        
Sbjct: 90  AMLKLGLKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIEDLSSQLQTQ 149

Query: 447 XXXXFRMPDMSSVMAKSD-XXXXXXXXXXXXXXXXXXXXXXRDIDLVMTQAGVSRGKAVK 623
               FRMPDM SVMAK D                        DIDLVMTQAGVSRGKAVK
Sbjct: 150 AAQQFRMPDMGSVMAKQDQGTAADGGQPEEEEEVDETGVEPHDIDLVMTQAGVSRGKAVK 209

Query: 624 ALKAHDGDIVSAIMEITT 677
           ALK H+GDIV AIME+TT
Sbjct: 210 ALKTHNGDIVGAIMELTT 227


>ref|XP_003526769.1| PREDICTED: nascent polypeptide-associated complex subunit
           alpha-like protein 2-like [Glycine max]
          Length = 223

 Score =  161 bits (407), Expect = 2e-37
 Identities = 88/137 (64%), Positives = 94/137 (68%)
 Frame = +3

Query: 267 AMLKLGMKSVTGVSRVTIKRTKNVLFAISKPDVFKSPNSDTYVIFGEAKIEDXXXXXXXX 446
           AMLKLG+K VTGVSRVTIKRTKN+LF ISKPDVFKSPNS+TYVIFGEAKIED        
Sbjct: 87  AMLKLGLKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIEDLSSQLQTQ 146

Query: 447 XXXXFRMPDMSSVMAKSDXXXXXXXXXXXXXXXXXXXXXXRDIDLVMTQAGVSRGKAVKA 626
               FRMPDM SV AK +                       DIDLVMTQAGVSR KAVKA
Sbjct: 147 AAQQFRMPDMGSVTAKQEDAAAAAVQPEEEEEVDETGVEPHDIDLVMTQAGVSRSKAVKA 206

Query: 627 LKAHDGDIVSAIMEITT 677
           LK H+GDIV AIME+TT
Sbjct: 207 LKTHNGDIVGAIMELTT 223


>ref|XP_003523310.1| PREDICTED: nascent polypeptide-associated complex subunit
           alpha-like protein 2-like [Glycine max]
          Length = 223

 Score =  161 bits (407), Expect = 2e-37
 Identities = 88/137 (64%), Positives = 94/137 (68%)
 Frame = +3

Query: 267 AMLKLGMKSVTGVSRVTIKRTKNVLFAISKPDVFKSPNSDTYVIFGEAKIEDXXXXXXXX 446
           AMLKLG+K VTGVSRVTIKRTKN+LF ISKPDVFKSPNS+TYVIFGEAKIED        
Sbjct: 87  AMLKLGLKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIEDLSSQLQTQ 146

Query: 447 XXXXFRMPDMSSVMAKSDXXXXXXXXXXXXXXXXXXXXXXRDIDLVMTQAGVSRGKAVKA 626
               FRMPDM SV AK +                       DIDLVMTQAGVSR KAVKA
Sbjct: 147 AAQQFRMPDMGSVTAKQEDAAAAAAQPEEEEEVDETGVEPHDIDLVMTQAGVSRSKAVKA 206

Query: 627 LKAHDGDIVSAIMEITT 677
           LK H+GDIV AIME+TT
Sbjct: 207 LKTHNGDIVGAIMELTT 223


>gb|ACU14200.1| unknown [Glycine max]
          Length = 222

 Score =  161 bits (407), Expect = 2e-37
 Identities = 88/137 (64%), Positives = 94/137 (68%)
 Frame = +3

Query: 267 AMLKLGMKSVTGVSRVTIKRTKNVLFAISKPDVFKSPNSDTYVIFGEAKIEDXXXXXXXX 446
           AMLKLG+K VTGVSRVTIKRTKN+LF ISKPDVFKSPNS+TYVIFGEAKIED        
Sbjct: 86  AMLKLGLKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIEDLSSQLQTQ 145

Query: 447 XXXXFRMPDMSSVMAKSDXXXXXXXXXXXXXXXXXXXXXXRDIDLVMTQAGVSRGKAVKA 626
               FRMPDM SV AK +                       DIDLVMTQAGVSR KAVKA
Sbjct: 146 AAQQFRMPDMGSVTAKQEDAAAAAAQPEEEEEVDETGVEPHDIDLVMTQAGVSRSKAVKA 205

Query: 627 LKAHDGDIVSAIMEITT 677
           LK H+GDIV AIME+TT
Sbjct: 206 LKTHNGDIVGAIMELTT 222


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