BLASTX nr result
ID: Coptis24_contig00000047
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00000047 (455 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002304799.1| multidrug resistance protein ABC transporter... 111 5e-23 gb|AFK47609.1| unknown [Lotus japonicus] 111 7e-23 ref|XP_003617730.1| Multidrug resistance protein ABC transporter... 111 7e-23 ref|XP_003519622.1| PREDICTED: ABC transporter C family member 3... 109 2e-22 ref|XP_003518544.1| PREDICTED: ABC transporter C family member 3... 109 2e-22 >ref|XP_002304799.1| multidrug resistance protein ABC transporter family [Populus trichocarpa] gi|222842231|gb|EEE79778.1| multidrug resistance protein ABC transporter family [Populus trichocarpa] Length = 131 Score = 111 bits (278), Expect = 5e-23 Identities = 56/71 (78%), Positives = 65/71 (91%) Frame = -1 Query: 455 TLRQHFSNSTVITIAHRITSVIDSDMVLLLDNGLIMEYDSPSKLLEDKSSLFSKLVAEYT 276 TLRQHFS+ TVITIAHRITSV+DSDMVLLL +GLI EYDSP++LLE+KSS FS+LVAEYT Sbjct: 57 TLRQHFSDCTVITIAHRITSVLDSDMVLLLSHGLIEEYDSPTRLLENKSSSFSQLVAEYT 116 Query: 275 ARSNSSFETAT 243 RSN+SFE +T Sbjct: 117 VRSNTSFEKST 127 >gb|AFK47609.1| unknown [Lotus japonicus] Length = 510 Score = 111 bits (277), Expect = 7e-23 Identities = 57/68 (83%), Positives = 62/68 (91%) Frame = -1 Query: 455 TLRQHFSNSTVITIAHRITSVIDSDMVLLLDNGLIMEYDSPSKLLEDKSSLFSKLVAEYT 276 TLRQHFS STVITIAHRITSVIDSDMVLLL GLI EYDSP+KLLEDKSS F++LVAEYT Sbjct: 438 TLRQHFSESTVITIAHRITSVIDSDMVLLLSQGLIEEYDSPAKLLEDKSSSFAQLVAEYT 497 Query: 275 ARSNSSFE 252 R++SSFE Sbjct: 498 MRASSSFE 505 >ref|XP_003617730.1| Multidrug resistance protein ABC transporter family [Medicago truncatula] gi|355519065|gb|AET00689.1| Multidrug resistance protein ABC transporter family [Medicago truncatula] Length = 1521 Score = 111 bits (277), Expect = 7e-23 Identities = 56/67 (83%), Positives = 62/67 (92%) Frame = -1 Query: 455 TLRQHFSNSTVITIAHRITSVIDSDMVLLLDNGLIMEYDSPSKLLEDKSSLFSKLVAEYT 276 TLRQHF++STVITIAHRITSV+DSDMVLLLD GLI EYDSP+ LLEDKSS F+KLVAEYT Sbjct: 1455 TLRQHFTDSTVITIAHRITSVLDSDMVLLLDQGLIEEYDSPTTLLEDKSSSFAKLVAEYT 1514 Query: 275 ARSNSSF 255 RSNS+F Sbjct: 1515 MRSNSNF 1521 >ref|XP_003519622.1| PREDICTED: ABC transporter C family member 3-like [Glycine max] Length = 1493 Score = 109 bits (273), Expect = 2e-22 Identities = 55/68 (80%), Positives = 63/68 (92%) Frame = -1 Query: 455 TLRQHFSNSTVITIAHRITSVIDSDMVLLLDNGLIMEYDSPSKLLEDKSSLFSKLVAEYT 276 TLRQHFS+STVITIAHRITSV+DSDMVLLL GLI EYD+P++LLE+KSS F++LVAEYT Sbjct: 1421 TLRQHFSDSTVITIAHRITSVLDSDMVLLLSQGLIEEYDTPTRLLENKSSSFAQLVAEYT 1480 Query: 275 ARSNSSFE 252 RSNSSFE Sbjct: 1481 MRSNSSFE 1488 >ref|XP_003518544.1| PREDICTED: ABC transporter C family member 3-like [Glycine max] Length = 2054 Score = 109 bits (273), Expect = 2e-22 Identities = 55/68 (80%), Positives = 63/68 (92%) Frame = -1 Query: 455 TLRQHFSNSTVITIAHRITSVIDSDMVLLLDNGLIMEYDSPSKLLEDKSSLFSKLVAEYT 276 TLRQHFS+STVITIAHRITSV+DSDMVLLL GLI EYD+P++LLE+KSS F++LVAEYT Sbjct: 1982 TLRQHFSDSTVITIAHRITSVLDSDMVLLLSQGLIEEYDTPTRLLENKSSSFAQLVAEYT 2041 Query: 275 ARSNSSFE 252 RSNSSFE Sbjct: 2042 MRSNSSFE 2049