BLASTX nr result

ID: Coptis24_contig00000047 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000047
         (455 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304799.1| multidrug resistance protein ABC transporter...   111   5e-23
gb|AFK47609.1| unknown [Lotus japonicus]                              111   7e-23
ref|XP_003617730.1| Multidrug resistance protein ABC transporter...   111   7e-23
ref|XP_003519622.1| PREDICTED: ABC transporter C family member 3...   109   2e-22
ref|XP_003518544.1| PREDICTED: ABC transporter C family member 3...   109   2e-22

>ref|XP_002304799.1| multidrug resistance protein ABC transporter family [Populus
           trichocarpa] gi|222842231|gb|EEE79778.1| multidrug
           resistance protein ABC transporter family [Populus
           trichocarpa]
          Length = 131

 Score =  111 bits (278), Expect = 5e-23
 Identities = 56/71 (78%), Positives = 65/71 (91%)
 Frame = -1

Query: 455 TLRQHFSNSTVITIAHRITSVIDSDMVLLLDNGLIMEYDSPSKLLEDKSSLFSKLVAEYT 276
           TLRQHFS+ TVITIAHRITSV+DSDMVLLL +GLI EYDSP++LLE+KSS FS+LVAEYT
Sbjct: 57  TLRQHFSDCTVITIAHRITSVLDSDMVLLLSHGLIEEYDSPTRLLENKSSSFSQLVAEYT 116

Query: 275 ARSNSSFETAT 243
            RSN+SFE +T
Sbjct: 117 VRSNTSFEKST 127


>gb|AFK47609.1| unknown [Lotus japonicus]
          Length = 510

 Score =  111 bits (277), Expect = 7e-23
 Identities = 57/68 (83%), Positives = 62/68 (91%)
 Frame = -1

Query: 455 TLRQHFSNSTVITIAHRITSVIDSDMVLLLDNGLIMEYDSPSKLLEDKSSLFSKLVAEYT 276
           TLRQHFS STVITIAHRITSVIDSDMVLLL  GLI EYDSP+KLLEDKSS F++LVAEYT
Sbjct: 438 TLRQHFSESTVITIAHRITSVIDSDMVLLLSQGLIEEYDSPAKLLEDKSSSFAQLVAEYT 497

Query: 275 ARSNSSFE 252
            R++SSFE
Sbjct: 498 MRASSSFE 505


>ref|XP_003617730.1| Multidrug resistance protein ABC transporter family [Medicago
            truncatula] gi|355519065|gb|AET00689.1| Multidrug
            resistance protein ABC transporter family [Medicago
            truncatula]
          Length = 1521

 Score =  111 bits (277), Expect = 7e-23
 Identities = 56/67 (83%), Positives = 62/67 (92%)
 Frame = -1

Query: 455  TLRQHFSNSTVITIAHRITSVIDSDMVLLLDNGLIMEYDSPSKLLEDKSSLFSKLVAEYT 276
            TLRQHF++STVITIAHRITSV+DSDMVLLLD GLI EYDSP+ LLEDKSS F+KLVAEYT
Sbjct: 1455 TLRQHFTDSTVITIAHRITSVLDSDMVLLLDQGLIEEYDSPTTLLEDKSSSFAKLVAEYT 1514

Query: 275  ARSNSSF 255
             RSNS+F
Sbjct: 1515 MRSNSNF 1521


>ref|XP_003519622.1| PREDICTED: ABC transporter C family member 3-like [Glycine max]
          Length = 1493

 Score =  109 bits (273), Expect = 2e-22
 Identities = 55/68 (80%), Positives = 63/68 (92%)
 Frame = -1

Query: 455  TLRQHFSNSTVITIAHRITSVIDSDMVLLLDNGLIMEYDSPSKLLEDKSSLFSKLVAEYT 276
            TLRQHFS+STVITIAHRITSV+DSDMVLLL  GLI EYD+P++LLE+KSS F++LVAEYT
Sbjct: 1421 TLRQHFSDSTVITIAHRITSVLDSDMVLLLSQGLIEEYDTPTRLLENKSSSFAQLVAEYT 1480

Query: 275  ARSNSSFE 252
             RSNSSFE
Sbjct: 1481 MRSNSSFE 1488


>ref|XP_003518544.1| PREDICTED: ABC transporter C family member 3-like [Glycine max]
          Length = 2054

 Score =  109 bits (273), Expect = 2e-22
 Identities = 55/68 (80%), Positives = 63/68 (92%)
 Frame = -1

Query: 455  TLRQHFSNSTVITIAHRITSVIDSDMVLLLDNGLIMEYDSPSKLLEDKSSLFSKLVAEYT 276
            TLRQHFS+STVITIAHRITSV+DSDMVLLL  GLI EYD+P++LLE+KSS F++LVAEYT
Sbjct: 1982 TLRQHFSDSTVITIAHRITSVLDSDMVLLLSQGLIEEYDTPTRLLENKSSSFAQLVAEYT 2041

Query: 275  ARSNSSFE 252
             RSNSSFE
Sbjct: 2042 MRSNSSFE 2049


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