BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000044
         (2037 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276439.2| PREDICTED: signal recognition particle 54 kD...   916   0.0  
ref|XP_004143384.1| PREDICTED: signal recognition particle 54 kD...   897   0.0  
ref|XP_002530328.1| signal recognition particle protein, putativ...   889   0.0  
ref|XP_003554443.1| PREDICTED: signal recognition particle 54 kD...   869   0.0  
ref|XP_002322825.1| predicted protein [Populus trichocarpa] gi|2...   869   0.0  

>ref|XP_002276439.2| PREDICTED: signal recognition particle 54 kDa protein,
            chloroplastic-like [Vitis vinifera]
            gi|297740127|emb|CBI30309.3| unnamed protein product
            [Vitis vinifera]
          Length = 567

 Score =  916 bits (2368), Expect = 0.0
 Identities = 469/529 (88%), Positives = 504/529 (95%)
 Frame = -1

Query: 1872 WAGSSLSVHHSSRNHFTREIWSWVQMKRVTVRREMRGVVRAEMFGQLTSGLESAWNKLKG 1693
            W  S L +  SSRN FTRE+WS V+ K V+VRR+M GV+RAEMFGQLTSGLE+AW KLKG
Sbjct: 38   WTASKLPLPLSSRNPFTREVWSLVKSKSVSVRRQMPGVIRAEMFGQLTSGLEAAWTKLKG 97

Query: 1692 EEVLTKENIVEPMKEIRRALLEADVSLPVARRFVQTVSEQAVGVGLIRGVKPDQQLVKIV 1513
            EEVLTKENIVEPM++IRRALLEADVSLPV RRFVQ VSEQAVGVGLIRGVKPDQQLVKIV
Sbjct: 98   EEVLTKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSEQAVGVGLIRGVKPDQQLVKIV 157

Query: 1512 RDELVKLMGGEVSELVFAKSGPTIILLAGLQGVGKTTVCAKLAFYLKKQGKSCMLVAADI 1333
             DELVKLMGGEVSELVFAKSGPT+ILLAGLQGVGKTTVCAKLAFYLKKQGKSCMLVA D+
Sbjct: 158  HDELVKLMGGEVSELVFAKSGPTVILLAGLQGVGKTTVCAKLAFYLKKQGKSCMLVAGDV 217

Query: 1332 YRPAAIDQLVILGEQVNVPVYTAGTEVKPADIARQGLQEAKKKNADVVIVDTAGRLQIDK 1153
            YRPAAIDQLVILGEQV+VPVYTAGTEVKP+ IA+QGL+EA+KKN DVVIVDTAGRLQIDK
Sbjct: 218  YRPAAIDQLVILGEQVDVPVYTAGTEVKPSQIAKQGLEEARKKNIDVVIVDTAGRLQIDK 277

Query: 1152 GMMDELKEVKRALNPTEVLLVVDAMTGQEAAGLVTAFNLEIGITGAILTKLDGDSRGGAA 973
             MMDELK+VKRA+NPTEVLLVVDAMTGQEAA LVT FN+EIGITGAILTKLDGDSRGGAA
Sbjct: 278  AMMDELKDVKRAINPTEVLLVVDAMTGQEAAALVTTFNVEIGITGAILTKLDGDSRGGAA 337

Query: 972  LSVREVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRKEDAEEL 793
            LSV+EVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMR+EDAEEL
Sbjct: 338  LSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEEL 397

Query: 792  QKKIMSTKFDFNDFLKQTRTVAQMGSMTRVLGMIPGMGKVTPAQIREAEKSLKIMEGMIE 613
            QKKIMS KFDFNDFLKQTR VA+MGSMTRVLGMIPGMGKVTPAQIREAEKSLK+MEGMIE
Sbjct: 398  QKKIMSAKFDFNDFLKQTRAVARMGSMTRVLGMIPGMGKVTPAQIREAEKSLKMMEGMIE 457

Query: 612  AMTPEERENPELLAESPVRRKRVAKDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMQGGSI 433
            AMTPEERE PELLAESPVRRKRVA+DSGKTEQQVSQLVAQLFQMRVRMKNLMGVM+GGSI
Sbjct: 458  AMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSI 517

Query: 432  PALNNLEESLKAEQKAPPGTARRKRKSESRRQFADSAAARPSPRGFGTK 286
            PAL+NLEE+LK+EQKAPPGTARRKR+SESR+QFA+ A++RPSPRGFG++
Sbjct: 518  PALSNLEETLKSEQKAPPGTARRKRRSESRKQFAEPASSRPSPRGFGSR 566


>ref|XP_004143384.1| PREDICTED: signal recognition particle 54 kDa protein,
            chloroplastic-like [Cucumis sativus]
            gi|449482550|ref|XP_004156318.1| PREDICTED: signal
            recognition particle 54 kDa protein, chloroplastic-like
            [Cucumis sativus]
          Length = 572

 Score =  897 bits (2318), Expect = 0.0
 Identities = 461/528 (87%), Positives = 493/528 (93%)
 Frame = -1

Query: 1872 WAGSSLSVHHSSRNHFTREIWSWVQMKRVTVRREMRGVVRAEMFGQLTSGLESAWNKLKG 1693
            W GSS     SSRN FTREIW W+  K V  RR+MRGVVRAEMFGQLTSGLE+AWNKLKG
Sbjct: 44   WLGSSNLKSLSSRNLFTREIWGWLHAKTVNTRRDMRGVVRAEMFGQLTSGLEAAWNKLKG 103

Query: 1692 EEVLTKENIVEPMKEIRRALLEADVSLPVARRFVQTVSEQAVGVGLIRGVKPDQQLVKIV 1513
            EEVL+KENIVEPM++IRRALLEADVSLPV RRFVQ VS+QAVGVG+IRGV+PDQQLVKIV
Sbjct: 104  EEVLSKENIVEPMRDIRRALLEADVSLPVVRRFVQAVSDQAVGVGVIRGVRPDQQLVKIV 163

Query: 1512 RDELVKLMGGEVSELVFAKSGPTIILLAGLQGVGKTTVCAKLAFYLKKQGKSCMLVAADI 1333
             DELVKLMGGEVSELVF+KSGPT+ILLAGLQGVGKTTVCAKLA YLKKQGKSCMLVA D+
Sbjct: 164  HDELVKLMGGEVSELVFSKSGPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDV 223

Query: 1332 YRPAAIDQLVILGEQVNVPVYTAGTEVKPADIARQGLQEAKKKNADVVIVDTAGRLQIDK 1153
            YRPAAIDQLVILGEQV VPVYTAGTEVKP+DIA+QGLQEA+K   DVVIVDTAGRLQID+
Sbjct: 224  YRPAAIDQLVILGEQVGVPVYTAGTEVKPSDIAKQGLQEARKNKVDVVIVDTAGRLQIDR 283

Query: 1152 GMMDELKEVKRALNPTEVLLVVDAMTGQEAAGLVTAFNLEIGITGAILTKLDGDSRGGAA 973
             MMDELKEVKR +NPTEVLLVVDAMTGQEAA LVT FN+EIGITGAILTKLDGDSRGGAA
Sbjct: 284  AMMDELKEVKRVINPTEVLLVVDAMTGQEAAALVTTFNIEIGITGAILTKLDGDSRGGAA 343

Query: 972  LSVREVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRKEDAEEL 793
            LSV+EVSGKPIKLVGRGERM+DLEPFYPDRMAGRILGMGDVLSFVEKAQEVMR+EDAEEL
Sbjct: 344  LSVKEVSGKPIKLVGRGERMDDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEEL 403

Query: 792  QKKIMSTKFDFNDFLKQTRTVAQMGSMTRVLGMIPGMGKVTPAQIREAEKSLKIMEGMIE 613
            QKKI+S KFDFNDFLKQTR VA+MGSMTRV+GMIPGMGKVTPAQ+REAEKSLKIME MIE
Sbjct: 404  QKKILSAKFDFNDFLKQTRAVARMGSMTRVIGMIPGMGKVTPAQVREAEKSLKIMESMIE 463

Query: 612  AMTPEERENPELLAESPVRRKRVAKDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMQGGSI 433
            AMTPEERE PELLAESP RRKRVA+DSGKTEQQVSQLVAQLFQMRVRMKNLMGVM+GGSI
Sbjct: 464  AMTPEEREKPELLAESPARRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSI 523

Query: 432  PALNNLEESLKAEQKAPPGTARRKRKSESRRQFADSAAARPSPRGFGT 289
            PALNNLEE+LKAEQKAPPGTARRKR+SESR+QFA+S   R SPRGFG+
Sbjct: 524  PALNNLEEALKAEQKAPPGTARRKRRSESRKQFANS-ETRSSPRGFGS 570


>ref|XP_002530328.1| signal recognition particle protein, putative [Ricinus communis]
            gi|223530132|gb|EEF32044.1| signal recognition particle
            protein, putative [Ricinus communis]
          Length = 572

 Score =  889 bits (2296), Expect = 0.0
 Identities = 458/531 (86%), Positives = 494/531 (93%), Gaps = 3/531 (0%)
 Frame = -1

Query: 1872 WAGSSLSVHH-SSRNHFTREIWSWVQMKR--VTVRREMRGVVRAEMFGQLTSGLESAWNK 1702
            W G S +V   SSRN FTREIW WV  K   VT+RR+    V+AEMFGQLT+GLESAW+K
Sbjct: 40   WTGCSGTVASLSSRNLFTREIWRWVNCKSSVVTLRRDFHSAVKAEMFGQLTTGLESAWSK 99

Query: 1701 LKGEEVLTKENIVEPMKEIRRALLEADVSLPVARRFVQTVSEQAVGVGLIRGVKPDQQLV 1522
            LKG E LTKENI EPM+++RRALLEADVSLPV RRFVQ+V+++A+GVGLIRGVKPDQQLV
Sbjct: 100  LKGAETLTKENIAEPMRDMRRALLEADVSLPVVRRFVQSVTDEAIGVGLIRGVKPDQQLV 159

Query: 1521 KIVRDELVKLMGGEVSELVFAKSGPTIILLAGLQGVGKTTVCAKLAFYLKKQGKSCMLVA 1342
            KIV DELVKLMGGEVSELVFAK  PT+ILLAGLQGVGKTTVCAKLA YLKKQGKSCMLVA
Sbjct: 160  KIVHDELVKLMGGEVSELVFAKYSPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVA 219

Query: 1341 ADIYRPAAIDQLVILGEQVNVPVYTAGTEVKPADIARQGLQEAKKKNADVVIVDTAGRLQ 1162
             D+YRPAAIDQLVILGEQV VPVYT GTEVKP++IA++GL+EAKKKN DVVIVDTAGRLQ
Sbjct: 220  GDVYRPAAIDQLVILGEQVGVPVYTEGTEVKPSEIAKRGLEEAKKKNIDVVIVDTAGRLQ 279

Query: 1161 IDKGMMDELKEVKRALNPTEVLLVVDAMTGQEAAGLVTAFNLEIGITGAILTKLDGDSRG 982
            IDKGMMDELKEVKR LNPTEVLLVVDAMTGQEAA LVT FNLEIGITGAILTKLDGDSRG
Sbjct: 280  IDKGMMDELKEVKRVLNPTEVLLVVDAMTGQEAAALVTTFNLEIGITGAILTKLDGDSRG 339

Query: 981  GAALSVREVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRKEDA 802
            GAALSV+EVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMR+EDA
Sbjct: 340  GAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDA 399

Query: 801  EELQKKIMSTKFDFNDFLKQTRTVAQMGSMTRVLGMIPGMGKVTPAQIREAEKSLKIMEG 622
            E+LQKKIMS KFDFNDFLKQTR VA+MGSMTRV+GMIPGMGKVTPAQIREAEKSLKIME 
Sbjct: 400  EDLQKKIMSAKFDFNDFLKQTRAVARMGSMTRVIGMIPGMGKVTPAQIREAEKSLKIMES 459

Query: 621  MIEAMTPEERENPELLAESPVRRKRVAKDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMQG 442
            MIEAMTPEERE PELLAESP RRKR+A+DSGKTEQQVSQLVAQLFQMRVRMKNLMGVM+G
Sbjct: 460  MIEAMTPEEREKPELLAESPTRRKRIAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 519

Query: 441  GSIPALNNLEESLKAEQKAPPGTARRKRKSESRRQFADSAAARPSPRGFGT 289
            GSIPAL+NLE++LKAEQKAPPGTARRKR+SESRRQFADSA++RPSPRGFG+
Sbjct: 520  GSIPALSNLEDALKAEQKAPPGTARRKRRSESRRQFADSASSRPSPRGFGS 570


>ref|XP_003554443.1| PREDICTED: signal recognition particle 54 kDa protein,
            chloroplastic-like [Glycine max]
          Length = 565

 Score =  869 bits (2245), Expect = 0.0
 Identities = 449/532 (84%), Positives = 493/532 (92%), Gaps = 3/532 (0%)
 Frame = -1

Query: 1872 WAGSSLSVHHSSRNHFTREIWSWVQM--KRVTVRREMRGVV-RAEMFGQLTSGLESAWNK 1702
            W  +SL+    S N F +E+W WV    K V VRR+ RGVV RAEMFGQLTSGLE+AWNK
Sbjct: 37   WTNASLT----SPNCFAKEVWGWVNSNSKGVAVRRDTRGVVVRAEMFGQLTSGLETAWNK 92

Query: 1701 LKGEEVLTKENIVEPMKEIRRALLEADVSLPVARRFVQTVSEQAVGVGLIRGVKPDQQLV 1522
            LKGEEVL+KENIVEPM++IRRALLEADVSLPV RRFVQ+VS+QAVGVG+IRGV+PDQQLV
Sbjct: 93   LKGEEVLSKENIVEPMRDIRRALLEADVSLPVVRRFVQSVSDQAVGVGVIRGVRPDQQLV 152

Query: 1521 KIVRDELVKLMGGEVSELVFAKSGPTIILLAGLQGVGKTTVCAKLAFYLKKQGKSCMLVA 1342
            KIV DELV+LMGGEVSELVFAKSGPT+ILLAGLQGVGKTTVCAKLA YLKKQGKSCMLVA
Sbjct: 153  KIVHDELVRLMGGEVSELVFAKSGPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVA 212

Query: 1341 ADIYRPAAIDQLVILGEQVNVPVYTAGTEVKPADIARQGLQEAKKKNADVVIVDTAGRLQ 1162
             D+YRPAAIDQL ILG+QV+VPVYTAGT+VKP++IA+QGL+EAKKK  DVVIVDTAGRLQ
Sbjct: 213  GDVYRPAAIDQLAILGKQVDVPVYTAGTDVKPSEIAKQGLEEAKKKKIDVVIVDTAGRLQ 272

Query: 1161 IDKGMMDELKEVKRALNPTEVLLVVDAMTGQEAAGLVTAFNLEIGITGAILTKLDGDSRG 982
            IDK MMDELKEVK+ALNPTEVLLVVDAMTGQEAA LVT FNLEIGITGAILTKLDGDSRG
Sbjct: 273  IDKTMMDELKEVKKALNPTEVLLVVDAMTGQEAAALVTTFNLEIGITGAILTKLDGDSRG 332

Query: 981  GAALSVREVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRKEDA 802
            GAALSV+EVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQ+VMR+EDA
Sbjct: 333  GAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQQVMRQEDA 392

Query: 801  EELQKKIMSTKFDFNDFLKQTRTVAQMGSMTRVLGMIPGMGKVTPAQIREAEKSLKIMEG 622
            EELQKKIMS KFDFNDFLKQTRTVA+MGS++RV+GMIPGMGKVTPAQIR+AEK+L+ ME 
Sbjct: 393  EELQKKIMSAKFDFNDFLKQTRTVAKMGSVSRVIGMIPGMGKVTPAQIRDAEKNLQNMEA 452

Query: 621  MIEAMTPEERENPELLAESPVRRKRVAKDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMQG 442
            MIEAMTPEERE PELLAESPVRRKRVA+DSGKTEQQVSQLVAQLFQMRVRMKNLMGVM+ 
Sbjct: 453  MIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMES 512

Query: 441  GSIPALNNLEESLKAEQKAPPGTARRKRKSESRRQFADSAAARPSPRGFGTK 286
            GS+P L+NLEE+LKAE+KAPPGTARR+++SESR  F DS  ARPSPRGFG+K
Sbjct: 513  GSLPTLSNLEEALKAEEKAPPGTARRRKRSESRSVFGDSTPARPSPRGFGSK 564


>ref|XP_002322825.1| predicted protein [Populus trichocarpa] gi|222867455|gb|EEF04586.1|
            predicted protein [Populus trichocarpa]
          Length = 576

 Score =  869 bits (2245), Expect = 0.0
 Identities = 450/531 (84%), Positives = 488/531 (91%), Gaps = 3/531 (0%)
 Frame = -1

Query: 1872 WAGSSLSVHH-SSRNHFTREIWSWVQMKRV-TVRREMRG-VVRAEMFGQLTSGLESAWNK 1702
            W GSS +V   SSRN FT+E+W WV  K V T RREM G VV+AEMFGQLTSGLESAWNK
Sbjct: 44   WTGSSNNVTSLSSRNSFTKEMWRWVTCKSVVTFRREMGGGVVKAEMFGQLTSGLESAWNK 103

Query: 1701 LKGEEVLTKENIVEPMKEIRRALLEADVSLPVARRFVQTVSEQAVGVGLIRGVKPDQQLV 1522
            LKGEEVLTKENIVEPM++IRRALLEADVSLPV RRFVQ+VS+QAVGVGL+RGVKPDQQLV
Sbjct: 104  LKGEEVLTKENIVEPMRDIRRALLEADVSLPVVRRFVQSVSDQAVGVGLVRGVKPDQQLV 163

Query: 1521 KIVRDELVKLMGGEVSELVFAKSGPTIILLAGLQGVGKTTVCAKLAFYLKKQGKSCMLVA 1342
            KIV DELVKLMGGEVSELVFAKS PT+ILLAGLQGVGKTTVCAKLA YLKKQGKSCML+A
Sbjct: 164  KIVHDELVKLMGGEVSELVFAKSAPTVILLAGLQGVGKTTVCAKLANYLKKQGKSCMLIA 223

Query: 1341 ADIYRPAAIDQLVILGEQVNVPVYTAGTEVKPADIARQGLQEAKKKNADVVIVDTAGRLQ 1162
             D+YRPAAIDQLVILGEQV VPVYT GT+VKP++IAR+GL EAKKKN DVVIVDTAGRLQ
Sbjct: 224  GDVYRPAAIDQLVILGEQVGVPVYTEGTDVKPSEIARKGLSEAKKKNIDVVIVDTAGRLQ 283

Query: 1161 IDKGMMDELKEVKRALNPTEVLLVVDAMTGQEAAGLVTAFNLEIGITGAILTKLDGDSRG 982
            IDKGMMDELK+VK  LNPTEVLLVVDAMTGQEAA LVT FNLEIGITGAILTKLDGDSRG
Sbjct: 284  IDKGMMDELKDVKLILNPTEVLLVVDAMTGQEAAALVTTFNLEIGITGAILTKLDGDSRG 343

Query: 981  GAALSVREVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRKEDA 802
            GAALSV+EVSGKPIKLVGRGERMEDLEPFYP+RMAGRILGMGDVLSFVEKAQEVMR+EDA
Sbjct: 344  GAALSVKEVSGKPIKLVGRGERMEDLEPFYPNRMAGRILGMGDVLSFVEKAQEVMRQEDA 403

Query: 801  EELQKKIMSTKFDFNDFLKQTRTVAQMGSMTRVLGMIPGMGKVTPAQIREAEKSLKIMEG 622
            EELQKKIMS  FDFNDFLKQTR VA+MGSMTRV+GMIPGM KVTP Q+REAEK+LKIME 
Sbjct: 404  EELQKKIMSANFDFNDFLKQTRAVAKMGSMTRVIGMIPGMAKVTPGQVREAEKNLKIMEA 463

Query: 621  MIEAMTPEERENPELLAESPVRRKRVAKDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMQG 442
            MIE MTPEERE PELLAESP RRKRVA+ SGKTEQQVSQLVAQLFQMRVRMKNLMGVM+G
Sbjct: 464  MIEVMTPEEREKPELLAESPERRKRVAQASGKTEQQVSQLVAQLFQMRVRMKNLMGVMEG 523

Query: 441  GSIPALNNLEESLKAEQKAPPGTARRKRKSESRRQFADSAAARPSPRGFGT 289
            GSIP+L+NLE++LK +QKAPPGTARR+RK+ES ++F DS ++RP P GFG+
Sbjct: 524  GSIPSLSNLEDALKTKQKAPPGTARRRRKTESSKRFVDSVSSRPGPHGFGS 574