BLASTX nr result

ID: Coptis24_contig00000042 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000042
         (766 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31836.3| unnamed protein product [Vitis vinifera]              184   1e-63
ref|XP_002274702.1| PREDICTED: putative dihydrodipicolinate redu...   184   1e-63
ref|XP_002322434.1| predicted protein [Populus trichocarpa] gi|2...   175   9e-60
ref|XP_003536480.1| PREDICTED: putative dihydrodipicolinate redu...   171   3e-59
ref|XP_003556086.1| PREDICTED: putative dihydrodipicolinate redu...   171   6e-59

>emb|CBI31836.3| unnamed protein product [Vitis vinifera]
          Length = 303

 Score =  184 bits (467), Expect(2) = 1e-63
 Identities = 93/105 (88%), Positives = 99/105 (94%)
 Frame = -2

Query: 729 GCLVAPTLSIGSILLQQAAISASFHYNNVEIVESRAKASDFPSQDAVQIANNLSNLGQIY 550
           GCLVAPTLSIGSILLQQAAISASFHYNNVEIVESR   +DFPS DA+QIANNLSNLGQIY
Sbjct: 161 GCLVAPTLSIGSILLQQAAISASFHYNNVEIVESRPTPTDFPSPDAIQIANNLSNLGQIY 220

Query: 549 NREDLSTNELARGQLLGEDGIRVHSLVLPGLPSSTTVHFSGAGEV 415
           NRED+ST+ LARGQ+LGEDGIRVHSLVLPGLPSSTTV+FSG GEV
Sbjct: 221 NREDISTDILARGQVLGEDGIRVHSLVLPGLPSSTTVYFSGPGEV 265



 Score = 85.9 bits (211), Expect(2) = 1e-63
 Identities = 41/45 (91%), Positives = 44/45 (97%)
 Frame = -1

Query: 325 FSGAGEVYSLKHDITDVQCLVPGLILAIRRVVRLKNLVYGLEKFL 191
           FSG GEVYSLKHDITDV+CL+PGLILAIR+VVRLKNLVYGLEKFL
Sbjct: 259 FSGPGEVYSLKHDITDVRCLMPGLILAIRKVVRLKNLVYGLEKFL 303


>ref|XP_002274702.1| PREDICTED: putative dihydrodipicolinate reductase 3, chloroplastic
           [Vitis vinifera] gi|147816661|emb|CAN68386.1|
           hypothetical protein VITISV_012454 [Vitis vinifera]
          Length = 302

 Score =  184 bits (467), Expect(2) = 1e-63
 Identities = 93/105 (88%), Positives = 99/105 (94%)
 Frame = -2

Query: 729 GCLVAPTLSIGSILLQQAAISASFHYNNVEIVESRAKASDFPSQDAVQIANNLSNLGQIY 550
           GCLVAPTLSIGSILLQQAAISASFHYNNVEIVESR   +DFPS DA+QIANNLSNLGQIY
Sbjct: 160 GCLVAPTLSIGSILLQQAAISASFHYNNVEIVESRPTPTDFPSPDAIQIANNLSNLGQIY 219

Query: 549 NREDLSTNELARGQLLGEDGIRVHSLVLPGLPSSTTVHFSGAGEV 415
           NRED+ST+ LARGQ+LGEDGIRVHSLVLPGLPSSTTV+FSG GEV
Sbjct: 220 NREDISTDILARGQVLGEDGIRVHSLVLPGLPSSTTVYFSGPGEV 264



 Score = 85.9 bits (211), Expect(2) = 1e-63
 Identities = 41/45 (91%), Positives = 44/45 (97%)
 Frame = -1

Query: 325 FSGAGEVYSLKHDITDVQCLVPGLILAIRRVVRLKNLVYGLEKFL 191
           FSG GEVYSLKHDITDV+CL+PGLILAIR+VVRLKNLVYGLEKFL
Sbjct: 258 FSGPGEVYSLKHDITDVRCLMPGLILAIRKVVRLKNLVYGLEKFL 302


>ref|XP_002322434.1| predicted protein [Populus trichocarpa] gi|222869430|gb|EEF06561.1|
           predicted protein [Populus trichocarpa]
          Length = 300

 Score =  175 bits (444), Expect(2) = 9e-60
 Identities = 84/105 (80%), Positives = 97/105 (92%)
 Frame = -2

Query: 729 GCLVAPTLSIGSILLQQAAISASFHYNNVEIVESRAKASDFPSQDAVQIANNLSNLGQIY 550
           GCL+APTLSIGSILLQQAAI+ASFHYNN EIVES+A   DFPS DA+QI+ NLSNLGQIY
Sbjct: 158 GCLIAPTLSIGSILLQQAAITASFHYNNAEIVESKANPIDFPSMDAIQISKNLSNLGQIY 217

Query: 549 NREDLSTNELARGQLLGEDGIRVHSLVLPGLPSSTTVHFSGAGEV 415
           NRED+ST+ +ARGQ++GEDG+RVHS+VLPGLPSSTTV+FSG GEV
Sbjct: 218 NREDISTDVVARGQVIGEDGVRVHSMVLPGLPSSTTVYFSGPGEV 262



 Score = 81.6 bits (200), Expect(2) = 9e-60
 Identities = 38/45 (84%), Positives = 43/45 (95%)
 Frame = -1

Query: 325 FSGAGEVYSLKHDITDVQCLVPGLILAIRRVVRLKNLVYGLEKFL 191
           FSG GEVYS+KHDITDVQ L+PGL+LAIR+V+RLKNLVYGLEKFL
Sbjct: 256 FSGPGEVYSIKHDITDVQSLMPGLLLAIRKVIRLKNLVYGLEKFL 300


>ref|XP_003536480.1| PREDICTED: putative dihydrodipicolinate reductase 3,
           chloroplastic-like [Glycine max]
          Length = 301

 Score =  171 bits (434), Expect(2) = 3e-59
 Identities = 91/105 (86%), Positives = 96/105 (91%)
 Frame = -2

Query: 729 GCLVAPTLSIGSILLQQAAISASFHYNNVEIVESRAKASDFPSQDAVQIANNLSNLGQIY 550
           G LVAPTLSIGSILLQQAAISASFHY+NVEIVESRA A+D PS DA QIANNLSNLGQIY
Sbjct: 160 GVLVAPTLSIGSILLQQAAISASFHYSNVEIVESRANANDLPSADANQIANNLSNLGQIY 219

Query: 549 NREDLSTNELARGQLLGEDGIRVHSLVLPGLPSSTTVHFSGAGEV 415
           NRED ST+ LARGQ+LG DGIRVHS+VLPGLPSSTTVHFSG GEV
Sbjct: 220 NREDPSTDVLARGQVLG-DGIRVHSMVLPGLPSSTTVHFSGPGEV 263



 Score = 83.6 bits (205), Expect(2) = 3e-59
 Identities = 38/45 (84%), Positives = 44/45 (97%)
 Frame = -1

Query: 325 FSGAGEVYSLKHDITDVQCLVPGLILAIRRVVRLKNLVYGLEKFL 191
           FSG GEVYS+KHDITDV+CL+PGL+LAIR+VVRLKNLVYGLEKF+
Sbjct: 257 FSGPGEVYSIKHDITDVKCLMPGLLLAIRKVVRLKNLVYGLEKFI 301


>ref|XP_003556086.1| PREDICTED: putative dihydrodipicolinate reductase 3,
           chloroplastic-like [Glycine max]
          Length = 301

 Score =  171 bits (432), Expect(2) = 6e-59
 Identities = 90/105 (85%), Positives = 96/105 (91%)
 Frame = -2

Query: 729 GCLVAPTLSIGSILLQQAAISASFHYNNVEIVESRAKASDFPSQDAVQIANNLSNLGQIY 550
           G LVAPTLSIGSILLQQAAISASFHY+NVEIVESRA A+D PS DA QIANNLSNLGQIY
Sbjct: 160 GVLVAPTLSIGSILLQQAAISASFHYSNVEIVESRANANDLPSADANQIANNLSNLGQIY 219

Query: 549 NREDLSTNELARGQLLGEDGIRVHSLVLPGLPSSTTVHFSGAGEV 415
           NRED ST+ LARGQ+LG DGIRVHS+VLPG+PSSTTVHFSG GEV
Sbjct: 220 NREDPSTDVLARGQVLG-DGIRVHSMVLPGIPSSTTVHFSGPGEV 263



 Score = 83.6 bits (205), Expect(2) = 6e-59
 Identities = 38/45 (84%), Positives = 44/45 (97%)
 Frame = -1

Query: 325 FSGAGEVYSLKHDITDVQCLVPGLILAIRRVVRLKNLVYGLEKFL 191
           FSG GEVYS+KHDITDV+CL+PGL+LAIR+VVRLKNLVYGLEKF+
Sbjct: 257 FSGPGEVYSIKHDITDVKCLMPGLLLAIRKVVRLKNLVYGLEKFI 301


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