BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000027
         (960 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFO67217.1| putative chlorophyll a/b binding protein [Aralia ...   506   e-141
gb|AEY78525.1| chlorophyll a/b-binding protein [Tagetes erecta]       506   e-141
gb|ABO20852.1| chlorophyll a/b binding protein of LHCII type I [...   506   e-141
dbj|BAE46383.1| chlorophyll a/b binding protein [Panax ginseng]       504   e-141
ref|XP_004144543.1| PREDICTED: chlorophyll a-b binding protein 1...   503   e-140

>gb|AFO67217.1| putative chlorophyll a/b binding protein [Aralia elata]
          Length = 265

 Score =  506 bits (1303), Expect = e-141
 Identities = 242/265 (91%), Positives = 254/265 (95%), Gaps = 1/265 (0%)
 Frame = +2

Query: 53  MATSVVQQSAFAGQIALKPQNELVRKVGTFGG-RFSMRRTVKSSSQSIWYGPDRPKYLGP 229
           MATS +QQSAFAGQ ALKPQNELVRKVG+FGG   +MRRTVKS+ +SIWYGPDRPKYLGP
Sbjct: 1   MATSAIQQSAFAGQTALKPQNELVRKVGSFGGGHITMRRTVKSAPESIWYGPDRPKYLGP 60

Query: 230 FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSK 409
           FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE+L+K
Sbjct: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILAK 120

Query: 410 NGVKFGEAVWFKAGSQIFAEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRIGGGP 589
           NGVKFGEAVWFKAG+QIF+EGGLDYLGNPNLVHAQSILAIWA QVVLMGFVEGYR+GGGP
Sbjct: 121 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWASQVVLMGFVEGYRVGGGP 180

Query: 590 LGEGLDALYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVE 769
           LG GLD +YPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+E
Sbjct: 181 LGWGLDKIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240

Query: 770 NLYDHLADPTVNNAWAYATNFVPGK 844
           NLYDHLADP  NNAWAYATNFVPGK
Sbjct: 241 NLYDHLADPVANNAWAYATNFVPGK 265


>gb|AEY78525.1| chlorophyll a/b-binding protein [Tagetes erecta]
          Length = 265

 Score =  506 bits (1303), Expect = e-141
 Identities = 240/265 (90%), Positives = 254/265 (95%), Gaps = 1/265 (0%)
 Frame = +2

Query: 53  MATSVVQQSAFAGQIALKPQNELVRKVGTF-GGRFSMRRTVKSSSQSIWYGPDRPKYLGP 229
           MATS +QQSAFAG  ALKPQNELV+K G+F GGRF+MRRTVKS+ QSIWYGPDRPKYLGP
Sbjct: 1   MATSAIQQSAFAGSAALKPQNELVKKTGSFTGGRFTMRRTVKSAPQSIWYGPDRPKYLGP 60

Query: 230 FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSK 409
           FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE+LSK
Sbjct: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEVLSK 120

Query: 410 NGVKFGEAVWFKAGSQIFAEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRIGGGP 589
           NGVKFGEAVWFKAGSQIF+EGGLDYLGNPNL+HAQSILAIWA QVVLMG +EGYR+GGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGLIEGYRVGGGP 180

Query: 590 LGEGLDALYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVE 769
           LGEGLD +YPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+E
Sbjct: 181 LGEGLDKIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240

Query: 770 NLYDHLADPTVNNAWAYATNFVPGK 844
           NL+DHL+DP  NNAWAYATNFVPGK
Sbjct: 241 NLFDHLSDPVANNAWAYATNFVPGK 265


>gb|ABO20852.1| chlorophyll a/b binding protein of LHCII type I [Lilium
           longiflorum]
          Length = 264

 Score =  506 bits (1303), Expect = e-141
 Identities = 243/264 (92%), Positives = 252/264 (95%)
 Frame = +2

Query: 53  MATSVVQQSAFAGQIALKPQNELVRKVGTFGGRFSMRRTVKSSSQSIWYGPDRPKYLGPF 232
           MATS +QQSAF GQ ALK ++ELVRKVG  GGR SMRRTVKS+ QSIWYG DRPKYLGPF
Sbjct: 1   MATSAIQQSAFTGQTALKNRDELVRKVGVVGGRVSMRRTVKSAPQSIWYGADRPKYLGPF 60

Query: 233 SEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSKN 412
           SEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSKN
Sbjct: 61  SEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSKN 120

Query: 413 GVKFGEAVWFKAGSQIFAEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRIGGGPL 592
           GVKFGEAVWFKAG+QIF+EGGLDYLGNPNLVHAQSILAIWAVQVVLMGF+EGYRIGGGPL
Sbjct: 121 GVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFIEGYRIGGGPL 180

Query: 593 GEGLDALYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVEN 772
           GEGLD LYPGG+FDPLGLADDP+AFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVEN
Sbjct: 181 GEGLDPLYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVEN 240

Query: 773 LYDHLADPTVNNAWAYATNFVPGK 844
           LYDHLADP  NNAWAYATNFVPGK
Sbjct: 241 LYDHLADPATNNAWAYATNFVPGK 264


>dbj|BAE46383.1| chlorophyll a/b binding protein [Panax ginseng]
          Length = 265

 Score =  504 bits (1299), Expect = e-141
 Identities = 239/265 (90%), Positives = 255/265 (96%), Gaps = 1/265 (0%)
 Frame = +2

Query: 53  MATSVVQQSAFAGQIALKPQNELVRKVGTFGG-RFSMRRTVKSSSQSIWYGPDRPKYLGP 229
           MATS +Q+SAFAGQ ALKPQNELVRK+G+ GG R +MRRTV+S+ +SIWYGPDRPKYLGP
Sbjct: 1   MATSAIQRSAFAGQTALKPQNELVRKIGSLGGGRITMRRTVRSAPESIWYGPDRPKYLGP 60

Query: 230 FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSK 409
           FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE+L++
Sbjct: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILAR 120

Query: 410 NGVKFGEAVWFKAGSQIFAEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRIGGGP 589
           NGVKFGEAVWFKAG+QIF+EGGLDYLGNPNLVHAQSILAIWA QVVLMGFVEGYR+GGGP
Sbjct: 121 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWASQVVLMGFVEGYRVGGGP 180

Query: 590 LGEGLDALYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVE 769
           LGEGLD +YPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+E
Sbjct: 181 LGEGLDKIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240

Query: 770 NLYDHLADPTVNNAWAYATNFVPGK 844
           NLYDHLADP  NNAWAYATNFVPGK
Sbjct: 241 NLYDHLADPVANNAWAYATNFVPGK 265


>ref|XP_004144543.1| PREDICTED: chlorophyll a-b binding protein 151, chloroplastic-like
           [Cucumis sativus] gi|449511798|ref|XP_004164056.1|
           PREDICTED: chlorophyll a-b binding protein 151,
           chloroplastic-like [Cucumis sativus]
          Length = 265

 Score =  503 bits (1294), Expect = e-140
 Identities = 239/265 (90%), Positives = 253/265 (95%), Gaps = 1/265 (0%)
 Frame = +2

Query: 53  MATSVVQQSAFAGQIALKPQNELVRKVGTFGG-RFSMRRTVKSSSQSIWYGPDRPKYLGP 229
           MATS +QQSAFAGQ ALK  NELVRKVG  GG RF+MRRTVKS+ QSIWYGPDRPKYLGP
Sbjct: 1   MATSAIQQSAFAGQTALKQSNELVRKVGALGGARFTMRRTVKSAPQSIWYGPDRPKYLGP 60

Query: 230 FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSK 409
           FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL+K
Sbjct: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAK 120

Query: 410 NGVKFGEAVWFKAGSQIFAEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRIGGGP 589
           NGVKFGE+VWFKAGSQIF+EGGLDYLGNPNL+HAQSILAIWA QVVLMGFVEGYR+GGGP
Sbjct: 121 NGVKFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP 180

Query: 590 LGEGLDALYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVE 769
           LGEGLD +YPGG+FDPLGLADDP+AFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+E
Sbjct: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240

Query: 770 NLYDHLADPTVNNAWAYATNFVPGK 844
           NL+DH+ADP  NNAWAYATNFVPGK
Sbjct: 241 NLFDHVADPVANNAWAYATNFVPGK 265