BLASTX nr result

ID: Coptis24_contig00000026 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000026
         (1434 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284962.1| PREDICTED: uncharacterized protein LOC100252...   607   e-171
ref|XP_002515557.1| conserved hypothetical protein [Ricinus comm...   589   e-166
ref|XP_002308647.1| predicted protein [Populus trichocarpa] gi|2...   578   e-162
gb|ABK94923.1| unknown [Populus trichocarpa]                          577   e-162
ref|XP_002324280.1| predicted protein [Populus trichocarpa] gi|2...   574   e-161

>ref|XP_002284962.1| PREDICTED: uncharacterized protein LOC100252479 [Vitis vinifera]
          Length = 368

 Score =  607 bits (1566), Expect = e-171
 Identities = 290/364 (79%), Positives = 330/364 (90%), Gaps = 2/364 (0%)
 Frame = +3

Query: 63   LKQLILLSVLLCTTCHVTLAFTAGLLPNGDFELGPKASEMKGTVVIGRNAVPEWEISGFV 242
            ++ +  L +LLC TCH+ L+FT GLLPNG+FELGPK S+MKGT VIG +A+PEWE SGF+
Sbjct: 1    MRAVAFLLLLLCATCHIALSFTDGLLPNGNFELGPKPSDMKGTEVIGPHAIPEWETSGFI 60

Query: 243  EYIKSGQKQGDMLLVVPEGAFAVRLGNEASIKQRAKVVKGMYYTLTFSAARTCAQEERLN 422
            EYIK+GQKQGDMLLVVPEGAFAVRLGNEASIKQR KV+KGMYY++TFSAARTCAQEERLN
Sbjct: 61   EYIKAGQKQGDMLLVVPEGAFAVRLGNEASIKQRVKVIKGMYYSITFSAARTCAQEERLN 120

Query: 423  VSVAPDSGVLPIQTMYSSNGWDSYAWAYKAMSDVAEIVIHNPGVEEDAACGPLIDAIAMK 602
            +SVAPD GVLP+QT+YSSNGWDSYAWA++A  DV EIVIHNPGVEED ACGPLID++A +
Sbjct: 121  ISVAPDWGVLPMQTLYSSNGWDSYAWAFQADYDVIEIVIHNPGVEEDPACGPLIDSVAFR 180

Query: 603  ALYPPRATNKNLLKNGDFEEGPYVFPNASWGVLIPPNIEDDHSPLPGWMVESLKAVKYID 782
            ALYPPR ++KNLLKNG FEEGPYVFPN SWGVLIPPNIEDDHSPLPGWMVESLKAVKYID
Sbjct: 181  ALYPPRPSSKNLLKNGGFEEGPYVFPNTSWGVLIPPNIEDDHSPLPGWMVESLKAVKYID 240

Query: 783  AAHFTVPQGRRAVELVAGKESAIAQVVRTTPGRVYALTFAVGDASNACEGSMIVEAFAGR 962
            + HF+VPQ +RAVELVAGKESAIAQV RT PG+ YAL+F+VGDASN+CEGSM+VEAFAGR
Sbjct: 241  SDHFSVPQEKRAVELVAGKESAIAQVARTIPGKTYALSFSVGDASNSCEGSMVVEAFAGR 300

Query: 963  DTIKVPYESIGKGGFKRAILKFTAASTRTRIMFLSTFYTMKVD--ASLCGPVIDDIKVLS 1136
            DTIKVPYES GKGGFKRA+L+F A S RTRIMFLSTFYTM+ D  ASLCGPV+DD+K+LS
Sbjct: 301  DTIKVPYESKGKGGFKRAVLRFVAVSNRTRIMFLSTFYTMRSDDYASLCGPVLDDVKLLS 360

Query: 1137 VRNP 1148
            +R P
Sbjct: 361  LRTP 364


>ref|XP_002515557.1| conserved hypothetical protein [Ricinus communis]
            gi|1621268|emb|CAB02653.1| unknown [Ricinus communis]
            gi|223545501|gb|EEF47006.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 364

 Score =  589 bits (1519), Expect = e-166
 Identities = 282/360 (78%), Positives = 322/360 (89%), Gaps = 2/360 (0%)
 Frame = +3

Query: 75   ILLSVLLCTTCHVTLAFTAGLLPNGDFELGPKASEMKGTVVIGRNAVPEWEISGFVEYIK 254
            ILLSVLL  TC  +L+   GL+ NG+FEL PK S+MKGT VIG+NA+PEWEISGFVEYIK
Sbjct: 5    ILLSVLLLATCQFSLSIRDGLVKNGNFELAPKPSDMKGTQVIGKNAIPEWEISGFVEYIK 64

Query: 255  SGQKQGDMLLVVPEGAFAVRLGNEASIKQRAKVVKGMYYTLTFSAARTCAQEERLNVSVA 434
            SGQKQGDMLLVVPEGA+AVRLGNEASIKQR +V+KGMYY++TFSAARTCAQEE+LNVSV+
Sbjct: 65   SGQKQGDMLLVVPEGAYAVRLGNEASIKQRMRVIKGMYYSITFSAARTCAQEEKLNVSVS 124

Query: 435  PDSGVLPIQTMYSSNGWDSYAWAYKAMSDVAEIVIHNPGVEEDAACGPLIDAIAMKALYP 614
            PD GVLP+QTMYSSNGWDSYAWA++A     ++VIHNPGVEED ACGPLID++A++ALYP
Sbjct: 125  PDWGVLPMQTMYSSNGWDSYAWAFQAEFQYVDLVIHNPGVEEDPACGPLIDSVAIRALYP 184

Query: 615  PRATNKNLLKNGDFEEGPYVFPNASWGVLIPPNIEDDHSPLPGWMVESLKAVKYIDAAHF 794
            PR TNKN+LKNG FEEGPYVFPN SWGVLIPPNIEDDHSPLPGWMVESLKAVKYID  HF
Sbjct: 185  PRPTNKNILKNGGFEEGPYVFPNTSWGVLIPPNIEDDHSPLPGWMVESLKAVKYIDVDHF 244

Query: 795  TVPQGRRAVELVAGKESAIAQVVRTTPGRVYALTFAVGDASNACEGSMIVEAFAGRDTIK 974
            +VPQGRRA+ELVAGKESAIAQV RT  G+ Y L+FAVGDASN+CEGSM+VEAFAG+DT+K
Sbjct: 245  SVPQGRRAIELVAGKESAIAQVARTVIGKTYTLSFAVGDASNSCEGSMVVEAFAGKDTLK 304

Query: 975  VPYESIGKGGFKRAILKFTAASTRTRIMFLSTFYTMKVD--ASLCGPVIDDIKVLSVRNP 1148
            VPYES GKGGFKRA+L+F A + RTRIMF STFYTM+ D  +SLCGPV+DD+K+LSVR P
Sbjct: 305  VPYESKGKGGFKRAVLRFVAVANRTRIMFYSTFYTMRSDDFSSLCGPVLDDVKLLSVRKP 364


>ref|XP_002308647.1| predicted protein [Populus trichocarpa] gi|222854623|gb|EEE92170.1|
            predicted protein [Populus trichocarpa]
          Length = 365

 Score =  578 bits (1489), Expect = e-162
 Identities = 274/359 (76%), Positives = 320/359 (89%), Gaps = 2/359 (0%)
 Frame = +3

Query: 72   LILLSVLLCTTCHVTLAFTAGLLPNGDFELGPKASEMKGTVVIGRNAVPEWEISGFVEYI 251
            ++ LSVLL  TCH   +   GL+ NG+FE+GPK SE+KGT +IGR A+P+WEISGFVEYI
Sbjct: 5    MLPLSVLLLATCHFAFSIRDGLVENGNFEVGPKPSELKGTEMIGRYALPKWEISGFVEYI 64

Query: 252  KSGQKQGDMLLVVPEGAFAVRLGNEASIKQRAKVVKGMYYTLTFSAARTCAQEERLNVSV 431
            K+GQKQGDMLLVVPEGA+AVRLGNEASIKQ   V KGMYY++TFSAARTCAQEE LN+S+
Sbjct: 65   KAGQKQGDMLLVVPEGAYAVRLGNEASIKQVLNVTKGMYYSITFSAARTCAQEEELNISI 124

Query: 432  APDSGVLPIQTMYSSNGWDSYAWAYKAMSDVAEIVIHNPGVEEDAACGPLIDAIAMKALY 611
            +P+ GVLP+QTMYSSNGWDSYAWA+KA+ D+ E+V+HNPGVEED ACGPLID++A+KALY
Sbjct: 125  SPEWGVLPMQTMYSSNGWDSYAWAFKALLDIVELVVHNPGVEEDPACGPLIDSVAIKALY 184

Query: 612  PPRATNKNLLKNGDFEEGPYVFPNASWGVLIPPNIEDDHSPLPGWMVESLKAVKYIDAAH 791
            PPR TNKNL+KNG FEEGPY+ PN SWGVLIPPNIED HSPLPGWMVESLKAVK+ID  H
Sbjct: 185  PPRPTNKNLVKNGGFEEGPYLLPNTSWGVLIPPNIEDKHSPLPGWMVESLKAVKFIDVEH 244

Query: 792  FTVPQGRRAVELVAGKESAIAQVVRTTPGRVYALTFAVGDASNACEGSMIVEAFAGRDTI 971
            F+VPQGRRA+ELVAGKESAIAQVVRT  G+ Y L+FAVGDASN+CEGSM+VEAFAG+DT+
Sbjct: 245  FSVPQGRRAIELVAGKESAIAQVVRTIIGKTYTLSFAVGDASNSCEGSMVVEAFAGKDTV 304

Query: 972  KVPYESIGKGGFKRAILKFTAASTRTRIMFLSTFYTMKVD--ASLCGPVIDDIKVLSVR 1142
            KVPYES GKGGFKRA+LKF AAS+RTRIMF STFYTM+ D  +SLCGPV+DD+K+LS+R
Sbjct: 305  KVPYESKGKGGFKRAVLKFVAASSRTRIMFYSTFYTMRSDDFSSLCGPVVDDVKLLSLR 363


>gb|ABK94923.1| unknown [Populus trichocarpa]
          Length = 365

 Score =  577 bits (1486), Expect = e-162
 Identities = 273/359 (76%), Positives = 320/359 (89%), Gaps = 2/359 (0%)
 Frame = +3

Query: 72   LILLSVLLCTTCHVTLAFTAGLLPNGDFELGPKASEMKGTVVIGRNAVPEWEISGFVEYI 251
            ++ LSVLL  TCH   +   GL+ NG+FE+GPK SE+KGT +IGR A+P+WEISGFVEYI
Sbjct: 5    MLPLSVLLLATCHFAFSIRDGLVENGNFEVGPKPSELKGTEMIGRYALPKWEISGFVEYI 64

Query: 252  KSGQKQGDMLLVVPEGAFAVRLGNEASIKQRAKVVKGMYYTLTFSAARTCAQEERLNVSV 431
            K+GQKQGDMLLVVPEGA+AVRLGNEASIKQ   V KGMYY++TFSAARTCAQEE LN+S+
Sbjct: 65   KAGQKQGDMLLVVPEGAYAVRLGNEASIKQVLNVTKGMYYSITFSAARTCAQEEELNISI 124

Query: 432  APDSGVLPIQTMYSSNGWDSYAWAYKAMSDVAEIVIHNPGVEEDAACGPLIDAIAMKALY 611
            +P+ GVLP+QTMYSSNGWDSYAWA+KA+ D+ E+V+HNPGVEED ACGPLID++A+KALY
Sbjct: 125  SPEWGVLPMQTMYSSNGWDSYAWAFKALLDIVELVVHNPGVEEDPACGPLIDSVAIKALY 184

Query: 612  PPRATNKNLLKNGDFEEGPYVFPNASWGVLIPPNIEDDHSPLPGWMVESLKAVKYIDAAH 791
            PPR TNKNL+KNG FEEGPY+ PN SWGVLIPPNIED HSPLPGWMVESLKAVK+ID  H
Sbjct: 185  PPRPTNKNLVKNGGFEEGPYLLPNTSWGVLIPPNIEDKHSPLPGWMVESLKAVKFIDVEH 244

Query: 792  FTVPQGRRAVELVAGKESAIAQVVRTTPGRVYALTFAVGDASNACEGSMIVEAFAGRDTI 971
            F+VPQGRRA+ELVAGKESAIAQVVRT  G+ Y L+FAVGDASN+C+GSM+VEAFAG+DT+
Sbjct: 245  FSVPQGRRAIELVAGKESAIAQVVRTIIGKTYTLSFAVGDASNSCQGSMVVEAFAGKDTV 304

Query: 972  KVPYESIGKGGFKRAILKFTAASTRTRIMFLSTFYTMKVD--ASLCGPVIDDIKVLSVR 1142
            KVPYES GKGGFKRA+LKF AAS+RTRIMF STFYTM+ D  +SLCGPV+DD+K+LS+R
Sbjct: 305  KVPYESKGKGGFKRAVLKFVAASSRTRIMFYSTFYTMRSDDFSSLCGPVVDDVKLLSLR 363


>ref|XP_002324280.1| predicted protein [Populus trichocarpa] gi|222865714|gb|EEF02845.1|
            predicted protein [Populus trichocarpa]
          Length = 366

 Score =  574 bits (1480), Expect = e-161
 Identities = 278/359 (77%), Positives = 315/359 (87%), Gaps = 3/359 (0%)
 Frame = +3

Query: 75   ILLSVLL-CTTCHVTLAFTAGLLPNGDFELGPKASEMKGTVVIGRNAVPEWEISGFVEYI 251
            +LLSVLL  T CH   +F  GL+ NG+FEL PK S+MKGT +IGR A+P+WEISGFVEYI
Sbjct: 6    VLLSVLLFATNCHFAFSFIEGLVENGNFELSPKQSDMKGTQMIGRYALPKWEISGFVEYI 65

Query: 252  KSGQKQGDMLLVVPEGAFAVRLGNEASIKQRAKVVKGMYYTLTFSAARTCAQEERLNVSV 431
            K+GQKQGDMLLVVPEGA+A+RLGNEASIKQR  + KGMYY++TFSAARTCAQEE LN+SV
Sbjct: 66   KAGQKQGDMLLVVPEGAYAIRLGNEASIKQRLNLTKGMYYSITFSAARTCAQEETLNISV 125

Query: 432  APDSGVLPIQTMYSSNGWDSYAWAYKAMSDVAEIVIHNPGVEEDAACGPLIDAIAMKALY 611
            +P+ GVLP+QTMYSSNGWDSYAWA+KA+    E VIHNPGVEED ACGPLID++A  +LY
Sbjct: 126  SPEWGVLPMQTMYSSNGWDSYAWAFKALISPVEFVIHNPGVEEDPACGPLIDSVAFTSLY 185

Query: 612  PPRATNKNLLKNGDFEEGPYVFPNASWGVLIPPNIEDDHSPLPGWMVESLKAVKYIDAAH 791
            PPR TNKN+LKNG FEEGPYVFPN +WGVLIPPNIED HSPLPGWMVESLKAVKYID  H
Sbjct: 186  PPRPTNKNILKNGGFEEGPYVFPNTTWGVLIPPNIEDKHSPLPGWMVESLKAVKYIDVEH 245

Query: 792  FTVPQGRRAVELVAGKESAIAQVVRTTPGRVYALTFAVGDASNACEGSMIVEAFAGRDTI 971
            F+VPQGRRAVELVAGKESAIAQV RT  G+ Y L+FAVGDASN+CEGSM+VEAFAG+DT+
Sbjct: 246  FSVPQGRRAVELVAGKESAIAQVARTVIGKTYTLSFAVGDASNSCEGSMVVEAFAGKDTL 305

Query: 972  KVPYESIGKGGFKRAILKFTAASTRTRIMFLSTFYTMKVD--ASLCGPVIDDIKVLSVR 1142
            KVPYES GKGGFKRA+LKF A STRTRIMF STFYTM+ D  +SLCGPVIDDIK+LS+R
Sbjct: 306  KVPYESKGKGGFKRAVLKFVAVSTRTRIMFYSTFYTMRSDDFSSLCGPVIDDIKLLSLR 364


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