BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000015
         (1024 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABF17940.1| putative chloroplast chlorophyll a/b-binding prot...   494   e-137
emb|CAJ77390.1| major chlorophyll a/b binding protein LHCb1.2 [S...   491   e-137
ref|XP_004145734.1| PREDICTED: chlorophyll a-b binding protein, ...   491   e-136
sp|P12333.1|CB2A_SPIOL RecName: Full=Chlorophyll a-b binding pro...   491   e-136
emb|CAX64458.1| major chlorophyll a/b binding protein LHCb1.4 pr...   489   e-136

>gb|ABF17940.1| putative chloroplast chlorophyll a/b-binding protein [Carya
           cathayensis]
          Length = 267

 Score =  494 bits (1272), Expect = e-137
 Identities = 239/254 (94%), Positives = 248/254 (97%), Gaps = 1/254 (0%)
 Frame = -1

Query: 913 GKAVKIGPSASELLGEGRITMRKTGGGRPKPVSS-SPWYGPDRVKYLGPFSGESPSYLTG 737
           G+A+K+ PS+S+LLGEGR+TMRKT G RPKPVSS SPWYGPDRVKYLGPFSGE PSYLTG
Sbjct: 15  GQAIKLAPSSSDLLGEGRVTMRKTAG-RPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTG 73

Query: 736 EFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWF 557
           EFPGDYGWDTAGLSADPETF+KNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWF
Sbjct: 74  EFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWF 133

Query: 556 KAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPG 377
           KAG+QIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEV DP+YPG
Sbjct: 134 KAGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPG 193

Query: 376 GSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 197
           GSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN
Sbjct: 194 GSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 253

Query: 196 NNAWAYATNFVPGK 155
           NNAWAYATNFVPGK
Sbjct: 254 NNAWAYATNFVPGK 267


>emb|CAJ77390.1| major chlorophyll a/b binding protein LHCb1.2 [Spinacia oleracea]
          Length = 267

 Score =  491 bits (1265), Expect = e-137
 Identities = 238/254 (93%), Positives = 248/254 (97%), Gaps = 1/254 (0%)
 Frame = -1

Query: 913 GKAVKIGPSASELLGEGRITMRKTGGGRPKPVSS-SPWYGPDRVKYLGPFSGESPSYLTG 737
           GKA+K+GP+ASE+LGEGR+TMRKT G +PK VSS SPWYGPDRVKYLGPFSGE+PSYLTG
Sbjct: 15  GKAIKLGPTASEILGEGRVTMRKTAG-KPKNVSSGSPWYGPDRVKYLGPFSGEAPSYLTG 73

Query: 736 EFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWF 557
           EFPGDYGWDTAGLSADPETFSKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWF
Sbjct: 74  EFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWF 133

Query: 556 KAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPG 377
           KAGSQIFSEGGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYRIAGGPLGEVVDPLYPG
Sbjct: 134 KAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVVDPLYPG 193

Query: 376 GSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 197
           GSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN
Sbjct: 194 GSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 253

Query: 196 NNAWAYATNFVPGK 155
           NNAW++ATNFVPGK
Sbjct: 254 NNAWSFATNFVPGK 267


>ref|XP_004145734.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
           [Cucumis sativus] gi|449525484|ref|XP_004169747.1|
           PREDICTED: chlorophyll a-b binding protein,
           chloroplastic-like [Cucumis sativus]
          Length = 267

 Score =  491 bits (1263), Expect = e-136
 Identities = 237/254 (93%), Positives = 247/254 (97%), Gaps = 1/254 (0%)
 Frame = -1

Query: 913 GKAVKIGPSASELLGEGRITMRKTGGGRPKPVSS-SPWYGPDRVKYLGPFSGESPSYLTG 737
           G+AVK+ P+AS+LLGEGRITMRKT G +PKPVSS SPWYGPDRVKYLGPFSGE PSYLTG
Sbjct: 15  GQAVKLSPTASDLLGEGRITMRKTAG-KPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTG 73

Query: 736 EFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWF 557
           EFPGDYGWDTAGLSADPETF+KNRELEVIHSRWAMLGALGCVFPELL+RNGVKFGEAVWF
Sbjct: 74  EFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWF 133

Query: 556 KAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPG 377
           KAGSQIFSEGGLDYLGNPSLVHAQSILAIWA QV+LMGAVEGYRIAGGPLGE+ DP+YPG
Sbjct: 134 KAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPG 193

Query: 376 GSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 197
           GSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN
Sbjct: 194 GSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 253

Query: 196 NNAWAYATNFVPGK 155
           NNAWAYATNFVPGK
Sbjct: 254 NNAWAYATNFVPGK 267


>sp|P12333.1|CB2A_SPIOL RecName: Full=Chlorophyll a-b binding protein, chloroplastic;
           AltName: Full=LHCII type I CAB; Short=LHCP; Flags:
           Precursor gi|14240|emb|CAA32526.1| chlorophyll a/b
           binding protein precursor [Spinacia oleracea]
           gi|193783447|emb|CAJ77389.3| major chlorophyll a/b
           binding protein LHCb1.3 [Spinacia oleracea]
          Length = 267

 Score =  491 bits (1263), Expect = e-136
 Identities = 239/254 (94%), Positives = 247/254 (97%), Gaps = 1/254 (0%)
 Frame = -1

Query: 913 GKAVKIGPSASELLGEGRITMRKTGGGRPKPV-SSSPWYGPDRVKYLGPFSGESPSYLTG 737
           GKAVK+GP+ASE++GEGRITMRKT G +PK V SSSPWYGPDRVKYLGPFSGESPSYLTG
Sbjct: 15  GKAVKLGPTASEIIGEGRITMRKTAG-KPKTVQSSSPWYGPDRVKYLGPFSGESPSYLTG 73

Query: 736 EFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWF 557
           EFPGDYGWDTAGLSADPETF+KNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWF
Sbjct: 74  EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWF 133

Query: 556 KAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPG 377
           KAGSQIFSEGGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYRIAGGPLGEVVDPLYPG
Sbjct: 134 KAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVVDPLYPG 193

Query: 376 GSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 197
           GSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN
Sbjct: 194 GSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 253

Query: 196 NNAWAYATNFVPGK 155
           NNAW +ATNFVPGK
Sbjct: 254 NNAWNFATNFVPGK 267


>emb|CAX64458.1| major chlorophyll a/b binding protein LHCb1.4 precursor [Spinacia
           oleracea]
          Length = 267

 Score =  489 bits (1259), Expect = e-136
 Identities = 237/254 (93%), Positives = 247/254 (97%), Gaps = 1/254 (0%)
 Frame = -1

Query: 913 GKAVKIGPSASELLGEGRITMRKTGGGRPKPVSS-SPWYGPDRVKYLGPFSGESPSYLTG 737
           GKA+K+GP+ASE+L EGR+TMRKT G +PK VSS SPWYGPDRVKYLGPFSGE+PSYLTG
Sbjct: 15  GKAIKLGPTASEILSEGRVTMRKTAG-KPKNVSSGSPWYGPDRVKYLGPFSGEAPSYLTG 73

Query: 736 EFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWF 557
           EFPGDYGWDTAGLSADPETFSKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWF
Sbjct: 74  EFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWF 133

Query: 556 KAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPG 377
           KAGSQIFSEGGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYRIAGGPLGEVVDPLYPG
Sbjct: 134 KAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVVDPLYPG 193

Query: 376 GSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 197
           GSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN
Sbjct: 194 GSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 253

Query: 196 NNAWAYATNFVPGK 155
           NNAW++ATNFVPGK
Sbjct: 254 NNAWSFATNFVPGK 267