BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000013
         (934 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAJ77390.1| major chlorophyll a/b binding protein LHCb1.2 [S...   513   e-143
sp|P12333.1|CB2A_SPIOL RecName: Full=Chlorophyll a-b binding pro...   512   e-143
gb|ABF17940.1| putative chloroplast chlorophyll a/b-binding prot...   511   e-143
ref|XP_004145734.1| PREDICTED: chlorophyll a-b binding protein, ...   510   e-142
emb|CAX64458.1| major chlorophyll a/b binding protein LHCb1.4 pr...   508   e-142

>emb|CAJ77390.1| major chlorophyll a/b binding protein LHCb1.2 [Spinacia oleracea]
          Length = 267

 Score =  513 bits (1322), Expect = e-143
 Identities = 249/266 (93%), Positives = 257/266 (96%), Gaps = 1/266 (0%)
 Frame = -2

Query: 933 AASTMALSSPTFAGKAVKLAPAVSEILGEGRITMRKTGGKPKTVSS-SPWYGPDRVKYLG 757
           A+STMALSSP+ AGKA+KL P  SEILGEGR+TMRKT GKPK VSS SPWYGPDRVKYLG
Sbjct: 2   ASSTMALSSPSLAGKAIKLGPTASEILGEGRVTMRKTAGKPKNVSSGSPWYGPDRVKYLG 61

Query: 756 PFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLS 577
           PFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIH RWAMLGALGCVFPELL+
Sbjct: 62  PFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELLA 121

Query: 576 RNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGG 397
           RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYRIAGG
Sbjct: 122 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGG 181

Query: 396 PLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 217
           PLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPL
Sbjct: 182 PLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 241

Query: 216 ENLADHLADPVNNNAWAFATNFVPGK 139
           ENLADHLADPVNNNAW+FATNFVPGK
Sbjct: 242 ENLADHLADPVNNNAWSFATNFVPGK 267


>sp|P12333.1|CB2A_SPIOL RecName: Full=Chlorophyll a-b binding protein, chloroplastic;
           AltName: Full=LHCII type I CAB; Short=LHCP; Flags:
           Precursor gi|14240|emb|CAA32526.1| chlorophyll a/b
           binding protein precursor [Spinacia oleracea]
           gi|193783447|emb|CAJ77389.3| major chlorophyll a/b
           binding protein LHCb1.3 [Spinacia oleracea]
          Length = 267

 Score =  512 bits (1318), Expect = e-143
 Identities = 249/266 (93%), Positives = 257/266 (96%), Gaps = 1/266 (0%)
 Frame = -2

Query: 933 AASTMALSSPTFAGKAVKLAPAVSEILGEGRITMRKTGGKPKTV-SSSPWYGPDRVKYLG 757
           A+STMALSSP+ AGKAVKL P  SEI+GEGRITMRKT GKPKTV SSSPWYGPDRVKYLG
Sbjct: 2   ASSTMALSSPSLAGKAVKLGPTASEIIGEGRITMRKTAGKPKTVQSSSPWYGPDRVKYLG 61

Query: 756 PFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLS 577
           PFSGE+PSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIH RWAMLGALGCVFPELL+
Sbjct: 62  PFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 121

Query: 576 RNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGG 397
           RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYRIAGG
Sbjct: 122 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGG 181

Query: 396 PLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 217
           PLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPL
Sbjct: 182 PLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 241

Query: 216 ENLADHLADPVNNNAWAFATNFVPGK 139
           ENLADHLADPVNNNAW FATNFVPGK
Sbjct: 242 ENLADHLADPVNNNAWNFATNFVPGK 267


>gb|ABF17940.1| putative chloroplast chlorophyll a/b-binding protein [Carya
           cathayensis]
          Length = 267

 Score =  511 bits (1317), Expect = e-143
 Identities = 247/266 (92%), Positives = 259/266 (97%), Gaps = 1/266 (0%)
 Frame = -2

Query: 933 AASTMALSSPTFAGKAVKLAPAVSEILGEGRITMRKTGGKPKTVSS-SPWYGPDRVKYLG 757
           AASTMALSSP+ AG+A+KLAP+ S++LGEGR+TMRKT G+PK VSS SPWYGPDRVKYLG
Sbjct: 2   AASTMALSSPSLAGQAIKLAPSSSDLLGEGRVTMRKTAGRPKPVSSGSPWYGPDRVKYLG 61

Query: 756 PFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLS 577
           PFSGE PSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIHSRWAMLGALGCVFPELL+
Sbjct: 62  PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLA 121

Query: 576 RNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGG 397
           RNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGG
Sbjct: 122 RNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGG 181

Query: 396 PLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 217
           PLGEV DP+YPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL
Sbjct: 182 PLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 241

Query: 216 ENLADHLADPVNNNAWAFATNFVPGK 139
           ENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 242 ENLADHLADPVNNNAWAYATNFVPGK 267


>ref|XP_004145734.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
           [Cucumis sativus] gi|449525484|ref|XP_004169747.1|
           PREDICTED: chlorophyll a-b binding protein,
           chloroplastic-like [Cucumis sativus]
          Length = 267

 Score =  510 bits (1314), Expect = e-142
 Identities = 246/266 (92%), Positives = 258/266 (96%), Gaps = 1/266 (0%)
 Frame = -2

Query: 933 AASTMALSSPTFAGKAVKLAPAVSEILGEGRITMRKTGGKPKTVSS-SPWYGPDRVKYLG 757
           AAS+MALSSP+FAG+AVKL+P  S++LGEGRITMRKT GKPK VSS SPWYGPDRVKYLG
Sbjct: 2   AASSMALSSPSFAGQAVKLSPTASDLLGEGRITMRKTAGKPKPVSSGSPWYGPDRVKYLG 61

Query: 756 PFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLS 577
           PFSGE PSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIHSRWAMLGALGCVFPELLS
Sbjct: 62  PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS 121

Query: 576 RNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGG 397
           RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLVHAQSILAIWA QV+LMGAVEGYRIAGG
Sbjct: 122 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGG 181

Query: 396 PLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 217
           PLGE+ DP+YPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL
Sbjct: 182 PLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 241

Query: 216 ENLADHLADPVNNNAWAFATNFVPGK 139
           ENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 242 ENLADHLADPVNNNAWAYATNFVPGK 267


>emb|CAX64458.1| major chlorophyll a/b binding protein LHCb1.4 precursor [Spinacia
           oleracea]
          Length = 267

 Score =  508 bits (1309), Expect = e-142
 Identities = 246/266 (92%), Positives = 256/266 (96%), Gaps = 1/266 (0%)
 Frame = -2

Query: 933 AASTMALSSPTFAGKAVKLAPAVSEILGEGRITMRKTGGKPKTVSS-SPWYGPDRVKYLG 757
           A+++MALSSP+ AGKA+KL P  SEIL EGR+TMRKT GKPK VSS SPWYGPDRVKYLG
Sbjct: 2   ASTSMALSSPSLAGKAIKLGPTASEILSEGRVTMRKTAGKPKNVSSGSPWYGPDRVKYLG 61

Query: 756 PFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLS 577
           PFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIH RWAMLGALGCVFPELL+
Sbjct: 62  PFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELLA 121

Query: 576 RNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGG 397
           RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYRIAGG
Sbjct: 122 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGG 181

Query: 396 PLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 217
           PLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPL
Sbjct: 182 PLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 241

Query: 216 ENLADHLADPVNNNAWAFATNFVPGK 139
           ENLADHLADPVNNNAW+FATNFVPGK
Sbjct: 242 ENLADHLADPVNNNAWSFATNFVPGK 267