BLASTX nr result

ID: Coptis24_contig00000010 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00000010
         (1098 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83511.1| hypothetical protein VITISV_035079 [Vitis vinifera]   344   3e-92
gb|AFD63133.1| senescence-associated protein [Vitis quinquangula...   340   5e-91
ref|XP_002271684.1| PREDICTED: uncharacterized protein LOC100243...   338   1e-90
gb|ACF06508.1| senescence-associated protein [Elaeis guineensis]      337   3e-90
gb|ABK23290.1| unknown [Picea sitchensis]                             327   2e-87

>emb|CAN83511.1| hypothetical protein VITISV_035079 [Vitis vinifera]
          Length = 272

 Score =  344 bits (882), Expect = 3e-92
 Identities = 165/256 (64%), Positives = 186/256 (72%), Gaps = 3/256 (1%)
 Frame = +2

Query: 5   LLSIAILSTGIWLTARASTDCEKFLDKPLIVLGVFLLVVSLAGFIGACCRVSWILWXXXX 184
           LLS+ IL  GIWL+ RASTDCEKFL+KP+I LGVFL+VVSLAG IGACCRVSW+LW    
Sbjct: 18  LLSVPILGAGIWLSHRASTDCEKFLEKPVIALGVFLMVVSLAGLIGACCRVSWLLWVYLL 77

Query: 185 XXXXXXXXXXXXTIFAFVVTNKGAGEVVSERGYKEYRLGDYSNWLQKRVGNGKNWRRIRS 364
                       TIFAFVVTNKGAGEV+S +GYKEYRLGDYSNWLQKRV N KNW RI+S
Sbjct: 78  VMFLLIVLLFCFTIFAFVVTNKGAGEVLSGKGYKEYRLGDYSNWLQKRVNNTKNWNRIKS 137

Query: 365 CLEDSKVCKSLSDD-ANVDFQAYIKKSLSPLQSGCCKPPTECNFTYVNATVWNTPATGTN 541
           CL+D KVC+SLS D      Q +  + LSP+QSGCCKP  +C FTYV  T WNT      
Sbjct: 138 CLQDGKVCQSLSQDKVGETVQQFYAEQLSPIQSGCCKPSNDCGFTYVTPTYWNT-TNAPA 196

Query: 542 STNPDCATWTN--QNLCFGCQSCKAGVLDNLKKDWKKVAXXXXXXXXXXXVVYSIGCCAF 715
           STN DC++W N    LCF CQ+CKAGVLDNLK+DWKKVA           +VYSIGCCAF
Sbjct: 197 STNSDCSSWNNDPNTLCFNCQACKAGVLDNLKRDWKKVAIINIIFLVFLIIVYSIGCCAF 256

Query: 716 RNNREDNAYPRWKGHP 763
           RNNREDNA PRWK +P
Sbjct: 257 RNNREDNAQPRWKPYP 272


>gb|AFD63133.1| senescence-associated protein [Vitis quinquangularis]
          Length = 272

 Score =  340 bits (871), Expect = 5e-91
 Identities = 163/256 (63%), Positives = 185/256 (72%), Gaps = 3/256 (1%)
 Frame = +2

Query: 5   LLSIAILSTGIWLTARASTDCEKFLDKPLIVLGVFLLVVSLAGFIGACCRVSWILWXXXX 184
           LLS+ IL  GIWL+ RASTDCEKFL+KP+I LGVFL+VVSLAG IGACCRVSW+LW    
Sbjct: 18  LLSVPILGAGIWLSHRASTDCEKFLEKPVIALGVFLMVVSLAGLIGACCRVSWLLWVYLL 77

Query: 185 XXXXXXXXXXXXTIFAFVVTNKGAGEVVSERGYKEYRLGDYSNWLQKRVGNGKNWRRIRS 364
                       TIFAFVVTNKGAGEV+S +GYKEYRLGDYSNWLQKRV N KNW RI+S
Sbjct: 78  VMFLLIVLLFCFTIFAFVVTNKGAGEVLSGKGYKEYRLGDYSNWLQKRVNNTKNWNRIKS 137

Query: 365 CLEDSKVCKSLSDD-ANVDFQAYIKKSLSPLQSGCCKPPTECNFTYVNATVWNTPATGTN 541
           CL+D KVC+SLS D      + +  + LSP+QSGCCKP  +C FTYV  T W T      
Sbjct: 138 CLQDGKVCQSLSQDKVGETVEQFYAEQLSPIQSGCCKPSNDCGFTYVTPTNW-TSTNAAT 196

Query: 542 STNPDCATWTNQN--LCFGCQSCKAGVLDNLKKDWKKVAXXXXXXXXXXXVVYSIGCCAF 715
           STN DC++W N    LCF CQ+CKAGVLDNLK+DWKKVA           +VYSIGCCAF
Sbjct: 197 STNSDCSSWNNDPSILCFNCQACKAGVLDNLKRDWKKVAIINIIFLVFLIIVYSIGCCAF 256

Query: 716 RNNREDNAYPRWKGHP 763
           RNNREDNA PRWK +P
Sbjct: 257 RNNREDNAQPRWKPYP 272


>ref|XP_002271684.1| PREDICTED: uncharacterized protein LOC100243286 [Vitis vinifera]
          Length = 272

 Score =  338 bits (868), Expect = 1e-90
 Identities = 163/256 (63%), Positives = 184/256 (71%), Gaps = 3/256 (1%)
 Frame = +2

Query: 5   LLSIAILSTGIWLTARASTDCEKFLDKPLIVLGVFLLVVSLAGFIGACCRVSWILWXXXX 184
           LLS+ IL  GIWL+ RASTDCEKFL+KP+I LGVFL+VVSLAG IGACCRVSW+LW    
Sbjct: 18  LLSVPILGAGIWLSHRASTDCEKFLEKPVIALGVFLMVVSLAGLIGACCRVSWLLWVYLL 77

Query: 185 XXXXXXXXXXXXTIFAFVVTNKGAGEVVSERGYKEYRLGDYSNWLQKRVGNGKNWRRIRS 364
                       TIFAFVVTNKGAGEV+S +GYKEYRLGDYSNWLQKRV N KNW RI+S
Sbjct: 78  VMFLLIVLLFCFTIFAFVVTNKGAGEVLSGKGYKEYRLGDYSNWLQKRVNNTKNWNRIKS 137

Query: 365 CLEDSKVCKSLSDD-ANVDFQAYIKKSLSPLQSGCCKPPTECNFTYVNATVWNTPATGTN 541
           CL+D KVC+SLS D      Q +  + LSP+QSGCCKP  +C FTYV  T W T      
Sbjct: 138 CLQDGKVCQSLSQDKVGETVQQFYAEQLSPIQSGCCKPSNDCGFTYVTPTNW-TSTNAAT 196

Query: 542 STNPDCATWTNQN--LCFGCQSCKAGVLDNLKKDWKKVAXXXXXXXXXXXVVYSIGCCAF 715
            TN DC+ W N+   LCF CQ+CKAGVLDNLK+DWKKVA           +VYSIGCCAF
Sbjct: 197 YTNSDCSLWNNEPSILCFNCQACKAGVLDNLKRDWKKVAIINIIFLVFLIIVYSIGCCAF 256

Query: 716 RNNREDNAYPRWKGHP 763
           RNNREDNA PRWK +P
Sbjct: 257 RNNREDNAQPRWKPYP 272


>gb|ACF06508.1| senescence-associated protein [Elaeis guineensis]
          Length = 270

 Score =  337 bits (864), Expect = 3e-90
 Identities = 161/255 (63%), Positives = 184/255 (72%), Gaps = 2/255 (0%)
 Frame = +2

Query: 5   LLSIAILSTGIWLTARASTDCEKFLDKPLIVLGVFLLVVSLAGFIGACCRVSWILWXXXX 184
           LLSI I+  GIWL  R STDCEKFL  P+I +GVFL+VVSLAG +GACCRV+W+LW    
Sbjct: 18  LLSIPIVGGGIWLATRGSTDCEKFLQGPVIAVGVFLMVVSLAGLVGACCRVTWLLWVYLF 77

Query: 185 XXXXXXXXXXXXTIFAFVVTNKGAGEVVSERGYKEYRLGDYSNWLQKRVGNGKNWRRIRS 364
                       T+FAFVVTNKGAGEVVS RGYKEYRLGDYSNWLQKRV N K W RI+S
Sbjct: 78  VMFLLIVLLFCFTVFAFVVTNKGAGEVVSNRGYKEYRLGDYSNWLQKRVNNSKTWARIQS 137

Query: 365 CLEDSKVCKSLSDDANVDFQAYIKKSLSPLQSGCCKPPTECNFTYVNATVWNTPATGTNS 544
           C++DSKVC+SL  + N  FQ +   +LSP+QSGCCKPPTECNFTY + T W   +T +NS
Sbjct: 138 CIQDSKVCQSL-QEKNQTFQQFANDNLSPIQSGCCKPPTECNFTYQSETSW-AKSTISNS 195

Query: 545 TNPDCATWTNQN--LCFGCQSCKAGVLDNLKKDWKKVAXXXXXXXXXXXVVYSIGCCAFR 718
           +NPDC  W N    LC+ CQSCKAGVL N+K DWKKVA           VVYSIGCCAFR
Sbjct: 196 SNPDCNAWDNNPSILCYNCQSCKAGVLANIKNDWKKVAIINIIVLVFLIVVYSIGCCAFR 255

Query: 719 NNREDNAYPRWKGHP 763
           NNR D+AY  WKGHP
Sbjct: 256 NNRRDDAYGGWKGHP 270


>gb|ABK23290.1| unknown [Picea sitchensis]
          Length = 269

 Score =  327 bits (839), Expect = 2e-87
 Identities = 157/256 (61%), Positives = 187/256 (73%), Gaps = 3/256 (1%)
 Frame = +2

Query: 5   LLSIAILSTGIWLTARASTDCEKFLDKPLIVLGVFLLVVSLAGFIGACCRVSWILWXXXX 184
           +LSI IL  GIWL  RASTDCEKFL+KP+I +GVFL+VVS+AG IGACCRVSW+LW    
Sbjct: 18  VLSIPILGGGIWLANRASTDCEKFLEKPVIAIGVFLMVVSIAGLIGACCRVSWLLWVYLL 77

Query: 185 XXXXXXXXXXXXTIFAFVVTNKGAGEVVSERGYKEYRLGDYSNWLQKRVGNGKNWRRIRS 364
                       T+FAFVVTNKG GEVVS RGYKEYRLGDYSNWLQKRV N  NW+RIRS
Sbjct: 78  AMFLLIVLLFCFTVFAFVVTNKGVGEVVSNRGYKEYRLGDYSNWLQKRVENTANWKRIRS 137

Query: 365 CLEDSKVCKSLSDDA-NVDFQAYIKKSLSPLQSGCCKPPTECNFTYVNATVWNTPATGTN 541
           C+ D+KVCKSL+D++ N    A+ K++LSP+QSGCCKPPT C FTYV+  +WN   T T+
Sbjct: 138 CIIDAKVCKSLADESVNKAADAFYKENLSPIQSGCCKPPTSCGFTYVSPIMWN--GTATD 195

Query: 542 STNPDCATWTN--QNLCFGCQSCKAGVLDNLKKDWKKVAXXXXXXXXXXXVVYSIGCCAF 715
           ++N DC +W N    LC+ C SCKAGVL NLK DW+KVA           +VYS+GCCAF
Sbjct: 196 TSNTDCNSWNNTQSQLCYDCNSCKAGVLQNLKHDWRKVAAVNIVMLIFLVIVYSVGCCAF 255

Query: 716 RNNREDNAYPRWKGHP 763
           RNNR DN+Y   KG+P
Sbjct: 256 RNNRHDNSY--GKGYP 269


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