BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00043094
         (397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containi...   171   6e-41
ref|XP_002330073.1| predicted protein [Populus trichocarpa] gi|2...   171   7e-41
ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containi...   166   2e-39
ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containi...   156   1e-36
ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containi...   156   1e-36

>ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Glycine max]
          Length = 775

 Score =  171 bits (433), Expect = 6e-41
 Identities = 81/134 (60%), Positives = 107/134 (79%), Gaps = 2/134 (1%)
 Frame = +2

Query: 2   FEGREIHSHVLKFGFGVEVCVVNTLINIYCVCGCLSDARRVFDEAVVLDIVSWNSILAGY 181
           FEGR++H+H +  GF  +V V NTL+N+Y VCG +  ARRVF+E+ VLD+VSWN++LAGY
Sbjct: 122 FEGRQLHAHAVSSGFDGDVYVRNTLMNLYAVCGSVGSARRVFEESPVLDLVSWNTLLAGY 181

Query: 182 VHVGDVEGAVAVFEKMPEKNVIASNSMVALFGKVGSVSDARKLFDGIVG--RDMVAWTAM 355
           V  G+VE A  VFE MPE+N IASNSM+ALFG+ G V  AR++F+G+ G  RDMV+W+AM
Sbjct: 182 VQAGEVEEAERVFEGMPERNTIASNSMIALFGRKGCVEKARRIFNGVRGRERDMVSWSAM 241

Query: 356 LSCYEQNEMFDDAL 397
           +SCYEQNEM ++AL
Sbjct: 242 VSCYEQNEMGEEAL 255



 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 39/103 (37%), Positives = 67/103 (65%), Gaps = 1/103 (0%)
 Frame = +2

Query: 8   GREIHSHVLKFGFGVEVCVVNTLINIYCVCGCLSDARRVFDEA-VVLDIVSWNSILAGYV 184
           GR +H   +K G    V + N LI++Y  CG + DARR+FD+   +LD++SWNS+++GY+
Sbjct: 289 GRWVHGLAVKVGVEDYVSLKNALIHLYSSCGEIVDARRIFDDGGELLDLISWNSMISGYL 348

Query: 185 HVGDVEGAVAVFEKMPEKNVIASNSMVALFGKVGSVSDARKLF 313
             G ++ A  +F  MPEK+V++ ++M++ + +    S+A  LF
Sbjct: 349 RCGSIQDAEMLFYSMPEKDVVSWSAMISGYAQHECFSEALALF 391


>ref|XP_002330073.1| predicted protein [Populus trichocarpa] gi|222871498|gb|EEF08629.1|
           predicted protein [Populus trichocarpa]
          Length = 793

 Score =  171 bits (432), Expect = 7e-41
 Identities = 81/132 (61%), Positives = 109/132 (82%)
 Frame = +2

Query: 2   FEGREIHSHVLKFGFGVEVCVVNTLINIYCVCGCLSDARRVFDEAVVLDIVSWNSILAGY 181
           F+G+ I  HVLK GF  +V + NTLIN+Y VCG LSDAR+VFD + VLD+VSWNS+LAGY
Sbjct: 143 FDGKCIQDHVLKVGFDSDVYIQNTLINMYAVCGNLSDARKVFDGSSVLDMVSWNSMLAGY 202

Query: 182 VHVGDVEGAVAVFEKMPEKNVIASNSMVALFGKVGSVSDARKLFDGIVGRDMVAWTAMLS 361
           V VG+VE A  V+++MPE+NVIASNSM+ LFGK G+V +A KLF+ +  +D+V+W+A++S
Sbjct: 203 VLVGNVEEAKDVYDRMPERNVIASNSMIVLFGKKGNVEEACKLFNEMKQKDLVSWSALIS 262

Query: 362 CYEQNEMFDDAL 397
           CYEQNEM+++AL
Sbjct: 263 CYEQNEMYEEAL 274



 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 34/102 (33%), Positives = 65/102 (63%)
 Frame = +2

Query: 8   GREIHSHVLKFGFGVEVCVVNTLINIYCVCGCLSDARRVFDEAVVLDIVSWNSILAGYVH 187
           G+ +H  V+K G    V + N LI++Y  C  +  A+++F E+  LD +SWNS+++GYV 
Sbjct: 308 GKLVHGLVVKVGIETYVNLQNALIHMYSSCEEVVTAQKLFSESCCLDQISWNSMISGYVK 367

Query: 188 VGDVEGAVAVFEKMPEKNVIASNSMVALFGKVGSVSDARKLF 313
            G++E A A+F+ MP+K+ ++ ++M++ + +    ++   LF
Sbjct: 368 CGEIEKARALFDSMPDKDNVSWSAMISGYAQQDRFTETLVLF 409



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 31/111 (27%), Positives = 59/111 (53%), Gaps = 4/111 (3%)
 Frame = +2

Query: 5   EGREIHSHVLKFGFGVEVCVVNTLINIYCVCGCLSDARRVFDEAVVLDIVSWNSILAGYV 184
           +G+ IH+++ K G  + + +  TLIN+Y   GC+ DA  VF       + +WN+++ G  
Sbjct: 439 QGKWIHAYIRKNGLKINIILGTTLINMYMKLGCVEDALEVFKGLEEKGVSTWNALILGLA 498

Query: 185 HVGDVEGAVAVFEKMPEKNVIASN-SMVALFG---KVGSVSDARKLFDGIV 325
             G V+ ++  F +M E  V  +  + VA+ G    +G V +  + F+ ++
Sbjct: 499 MNGLVDKSLKTFSEMKEHGVTPNEITFVAVLGACRHMGLVDEGHRHFNSMI 549


>ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 808

 Score =  166 bits (419), Expect = 2e-39
 Identities = 78/132 (59%), Positives = 105/132 (79%)
 Frame = +2

Query: 2   FEGREIHSHVLKFGFGVEVCVVNTLINIYCVCGCLSDARRVFDEAVVLDIVSWNSILAGY 181
           F G+EIH HVLK GF  +V V NTLIN+Y VCG + DAR++FDE+ VLD VSWNSILAGY
Sbjct: 158 FGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGY 217

Query: 182 VHVGDVEGAVAVFEKMPEKNVIASNSMVALFGKVGSVSDARKLFDGIVGRDMVAWTAMLS 361
           V  GDVE A  +F++MP++N++ASNSM+ L GK+G V +A KLF+ +  +DMV+W+A++S
Sbjct: 218 VKKGDVEEAKLIFDQMPQRNIVASNSMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSALIS 277

Query: 362 CYEQNEMFDDAL 397
            YEQN M+++AL
Sbjct: 278 GYEQNGMYEEAL 289



 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 34/102 (33%), Positives = 65/102 (63%)
 Frame = +2

Query: 8   GREIHSHVLKFGFGVEVCVVNTLINIYCVCGCLSDARRVFDEAVVLDIVSWNSILAGYVH 187
           G+ IH  V++ G    V + N LI++Y   G + DA+++F+ +  LD +SWNS+++G + 
Sbjct: 323 GKMIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQKLFNGSHNLDQISWNSMISGCMK 382

Query: 188 VGDVEGAVAVFEKMPEKNVIASNSMVALFGKVGSVSDARKLF 313
            G VE A A+F+ MPEK++++ +++++ + +    S+   LF
Sbjct: 383 CGSVEKARALFDVMPEKDIVSWSAVISGYAQHDCFSETLALF 424



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 38/165 (23%), Positives = 72/165 (43%), Gaps = 41/165 (24%)
 Frame = +2

Query: 5   EGREIHSHVLKFGFGVEVCVVNTLINIYCVCGCLSDARRVFDEAVVLDIVSWNSILAGYV 184
           +G+ +H+++ K G  V V +  TL+++Y  CGC+ +A  VF+      + SWN+++ G  
Sbjct: 454 QGKWVHAYIRKNGLKVNVILGTTLLDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLA 513

Query: 185 HVGDVEGAVAVFEKMPEKNVIAS------------------------------------- 253
             G VE ++ +F +M    VI +                                     
Sbjct: 514 VNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNV 573

Query: 254 ---NSMVALFGKVGSVSDARKLFDGI-VGRDMVAWTAMLSCYEQN 376
                MV L G+ G +++A KL + + +  D+  W A+L   +++
Sbjct: 574 KHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKH 618


>ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 953

 Score =  156 bits (395), Expect = 1e-36
 Identities = 70/132 (53%), Positives = 105/132 (79%)
 Frame = +2

Query: 2   FEGREIHSHVLKFGFGVEVCVVNTLINIYCVCGCLSDARRVFDEAVVLDIVSWNSILAGY 181
           +E +++H+HVLK GF  +V V NTLIN + VC  ++DA RVF+E+ VLD VSWNSILAGY
Sbjct: 230 WEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGY 289

Query: 182 VHVGDVEGAVAVFEKMPEKNVIASNSMVALFGKVGSVSDARKLFDGIVGRDMVAWTAMLS 361
           + +G+VE A  ++ +MPE+++IASNSM+ LFG  G V +A KLFD ++ +DMV W+A+++
Sbjct: 290 IEIGNVEEAKHIYHQMPERSIIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIA 349

Query: 362 CYEQNEMFDDAL 397
           C++QNEM+++A+
Sbjct: 350 CFQQNEMYEEAI 361



 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 46/130 (35%), Positives = 71/130 (54%)
 Frame = +2

Query: 8   GREIHSHVLKFGFGVEVCVVNTLINIYCVCGCLSDARRVFDEAVVLDIVSWNSILAGYVH 187
           G+ IHS  LK G    + + N LI +Y  CG +  AR++FDEA +LD++SWNS+++GY+ 
Sbjct: 395 GKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLK 454

Query: 188 VGDVEGAVAVFEKMPEKNVIASNSMVALFGKVGSVSDARKLFDGIVGRDMVAWTAMLSCY 367
              V+ A A+F+ MPEK                               D+V+W++M+S Y
Sbjct: 455 CNLVDNAKAIFDSMPEK-------------------------------DVVSWSSMISGY 483

Query: 368 EQNEMFDDAL 397
            QN++FD+ L
Sbjct: 484 AQNDLFDETL 493


>ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 809

 Score =  156 bits (395), Expect = 1e-36
 Identities = 70/132 (53%), Positives = 105/132 (79%)
 Frame = +2

Query: 2   FEGREIHSHVLKFGFGVEVCVVNTLINIYCVCGCLSDARRVFDEAVVLDIVSWNSILAGY 181
           +E +++H+HVLK GF  +V V NTLIN + VC  ++DA RVF+E+ VLD VSWNSILAGY
Sbjct: 95  WEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGY 154

Query: 182 VHVGDVEGAVAVFEKMPEKNVIASNSMVALFGKVGSVSDARKLFDGIVGRDMVAWTAMLS 361
           + +G+VE A  ++ +MPE+++IASNSM+ LFG  G V +A KLFD ++ +DMV W+A+++
Sbjct: 155 IEIGNVEEAKHIYHQMPERSIIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIA 214

Query: 362 CYEQNEMFDDAL 397
           C++QNEM+++A+
Sbjct: 215 CFQQNEMYEEAI 226



 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 46/130 (35%), Positives = 71/130 (54%)
 Frame = +2

Query: 8   GREIHSHVLKFGFGVEVCVVNTLINIYCVCGCLSDARRVFDEAVVLDIVSWNSILAGYVH 187
           G+ IHS  LK G    + + N LI +Y  CG +  AR++FDEA +LD++SWNS+++GY+ 
Sbjct: 260 GKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLK 319

Query: 188 VGDVEGAVAVFEKMPEKNVIASNSMVALFGKVGSVSDARKLFDGIVGRDMVAWTAMLSCY 367
              V+ A A+F+ MPEK                               D+V+W++M+S Y
Sbjct: 320 CNLVDNAKAIFDSMPEK-------------------------------DVVSWSSMISGY 348

Query: 368 EQNEMFDDAL 397
            QN++FD+ L
Sbjct: 349 AQNDLFDETL 358