BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00043088
         (295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004137852.1| PREDICTED: probable polyadenylate-binding pr...   136   2e-30
ref|XP_002264613.1| PREDICTED: probable polyadenylate-binding pr...   130   1e-28
emb|CAN74140.1| hypothetical protein VITISV_008914 [Vitis vinifera]   130   1e-28
ref|XP_003625734.1| Polyadenylate binding protein [Medicago trun...   129   2e-28
ref|XP_002519416.1| polyadenylate-binding protein, putative [Ric...   128   6e-28

>ref|XP_004137852.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
           [Cucumis sativus] gi|449521207|ref|XP_004167621.1|
           PREDICTED: probable polyadenylate-binding protein
           At2g36660-like [Cucumis sativus]
          Length = 640

 Score =  136 bits (343), Expect = 2e-30
 Identities = 62/98 (63%), Positives = 85/98 (86%)
 Frame = -2

Query: 294 KGYGFVQFETVDSSDAAINSLNNSTFDEKEISVCNFVKKTDRVSSSPDVKYTNLYMKNLD 115
           KGYGFVQFE+ +S++AAI SLN  T  +K+I V  FV+K+DRV ++PD+KYTNLY+KNLD
Sbjct: 142 KGYGFVQFESEESANAAIESLNGFTVGDKQIYVGKFVRKSDRVLANPDIKYTNLYVKNLD 201

Query: 114 QELTEEYLKEKFSEFGKITNLVVSKDDNGNSRGFGFVN 1
            E+ EE+L+EKFSEFGKI+++++S+D+NG SRGFGF+N
Sbjct: 202 PEIGEEHLQEKFSEFGKISSMIISRDENGVSRGFGFIN 239



 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 41/109 (37%), Positives = 65/109 (59%), Gaps = 12/109 (11%)
 Frame = -2

Query: 294 KGYGFVQFETVDSSDAAINSLNNSTFDEKEISVCNFVKKTDRVS----------SSPDVK 145
           +G+GF+ FE  D +  A+ +LN S    K I +    KKT+R                +K
Sbjct: 233 RGFGFINFENSDDAKRALETLNGSQLGSKVIYIARAQKKTEREEVLRRHYEEKCKEQVLK 292

Query: 144 Y--TNLYMKNLDQELTEEYLKEKFSEFGKITNLVVSKDDNGNSRGFGFV 4
           Y  +N+Y+KN+D ++T+E L+E+FS+FG IT+  + +DD G ++GFGFV
Sbjct: 293 YKGSNVYVKNIDDDVTDEELRERFSQFGTITSSKLMRDDKGINKGFGFV 341


>ref|XP_002264613.1| PREDICTED: probable polyadenylate-binding protein At2g36660 [Vitis
           vinifera] gi|297740018|emb|CBI30200.3| unnamed protein
           product [Vitis vinifera]
          Length = 634

 Score =  130 bits (327), Expect = 1e-28
 Identities = 63/98 (64%), Positives = 77/98 (78%)
 Frame = -2

Query: 294 KGYGFVQFETVDSSDAAINSLNNSTFDEKEISVCNFVKKTDRVSSSPDVKYTNLYMKNLD 115
           KGYGFVQFE+ + ++AAI  LN    D K+I    FV+KTDRV  +PD KYTNLY+KNLD
Sbjct: 140 KGYGFVQFESEEYANAAIEKLNGFIIDGKQIYAGKFVRKTDRVLPNPDAKYTNLYIKNLD 199

Query: 114 QELTEEYLKEKFSEFGKITNLVVSKDDNGNSRGFGFVN 1
            ++TEE L+EKF EFGKI +LV+SKD+NG SRGFGFVN
Sbjct: 200 PDVTEEALREKFFEFGKIASLVISKDENGMSRGFGFVN 237



 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 37/109 (33%), Positives = 60/109 (55%), Gaps = 12/109 (11%)
 Frame = -2

Query: 294 KGYGFVQFETVDSSDAAINSLNNSTFDEKEISVCNFVKKTDRVS----------SSPDVK 145
           +G+GFV FE+ + +  A+ +LN      K + V    KK +R            +   +K
Sbjct: 231 RGFGFVNFESPEDAKRALEALNGLQLGSKVLYVARAQKKAEREQLLRRQFEEKRNEQILK 290

Query: 144 Y--TNLYMKNLDQELTEEYLKEKFSEFGKITNLVVSKDDNGNSRGFGFV 4
           Y  +N+Y+KN+D  + ++ L+E FS  GKIT+  + +D  G S+GFGFV
Sbjct: 291 YRGSNVYVKNIDDNVNDDDLREHFSVCGKITSAKLMRDQKGISKGFGFV 339


>emb|CAN74140.1| hypothetical protein VITISV_008914 [Vitis vinifera]
          Length = 544

 Score =  130 bits (327), Expect = 1e-28
 Identities = 63/98 (64%), Positives = 77/98 (78%)
 Frame = -2

Query: 294 KGYGFVQFETVDSSDAAINSLNNSTFDEKEISVCNFVKKTDRVSSSPDVKYTNLYMKNLD 115
           KGYGFVQFE+ + ++AAI  LN    D K+I    FV+KTDRV  +PD KYTNLY+KNLD
Sbjct: 160 KGYGFVQFESEEYANAAIEKLNGFIIDGKQIYAGKFVRKTDRVLPNPDAKYTNLYIKNLD 219

Query: 114 QELTEEYLKEKFSEFGKITNLVVSKDDNGNSRGFGFVN 1
            ++TEE L+EKF EFGKI +LV+SKD+NG SRGFGFVN
Sbjct: 220 PDVTEEALREKFFEFGKIASLVISKDENGMSRGFGFVN 257



 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 37/109 (33%), Positives = 60/109 (55%), Gaps = 12/109 (11%)
 Frame = -2

Query: 294 KGYGFVQFETVDSSDAAINSLNNSTFDEKEISVCNFVKKTDRVS----------SSPDVK 145
           +G+GFV FE+ + +  A+ +LN      K + V    KK +R            +   +K
Sbjct: 251 RGFGFVNFESPEDAKRALEALNGLQLGSKVLYVARAQKKAEREQLLRRQFEEKRNEQILK 310

Query: 144 Y--TNLYMKNLDQELTEEYLKEKFSEFGKITNLVVSKDDNGNSRGFGFV 4
           Y  +N+Y+KN+D  + ++ L+E FS  GKIT+  + +D  G S+GFGFV
Sbjct: 311 YRGSNVYVKNIDDNVNDDDLREHFSVCGKITSAKLMRDQKGISKGFGFV 359


>ref|XP_003625734.1| Polyadenylate binding protein [Medicago truncatula]
           gi|355500749|gb|AES81952.1| Polyadenylate binding
           protein [Medicago truncatula]
          Length = 613

 Score =  129 bits (325), Expect = 2e-28
 Identities = 62/98 (63%), Positives = 77/98 (78%)
 Frame = -2

Query: 294 KGYGFVQFETVDSSDAAINSLNNSTFDEKEISVCNFVKKTDRVSSSPDVKYTNLYMKNLD 115
           KGYGFVQFET +S++AAI  LN     +K+I V  FVKK+DR+SS PD +YTNLYMKNLD
Sbjct: 138 KGYGFVQFETEESANAAIERLNGYLVGDKQIYVGKFVKKSDRISSGPDTRYTNLYMKNLD 197

Query: 114 QELTEEYLKEKFSEFGKITNLVVSKDDNGNSRGFGFVN 1
            +++E  L+EKFS FGKI +L V+KD NG S+GFGFVN
Sbjct: 198 LDISETLLREKFSSFGKIISLAVAKDSNGMSKGFGFVN 235



 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 36/109 (33%), Positives = 59/109 (54%), Gaps = 12/109 (11%)
 Frame = -2

Query: 294 KGYGFVQFETVDSSDAAINSLNNSTFDEKEISVCNFVKKTDRVS----------SSPDVK 145
           KG+GFV F+  + +  A+ ++N      K + V    KK +R                +K
Sbjct: 229 KGFGFVNFDNPEDAKRAMETMNGLQLGSKILYVARAQKKAEREQILHQQFEEKRKEQVLK 288

Query: 144 Y--TNLYMKNLDQELTEEYLKEKFSEFGKITNLVVSKDDNGNSRGFGFV 4
           Y  +N+Y+KN+D  +++E L++ FS  G IT+  + +DD G S+GFGFV
Sbjct: 289 YKGSNIYVKNIDDNVSDEGLRDHFSVCGTITSAKIMRDDKGISKGFGFV 337


>ref|XP_002519416.1| polyadenylate-binding protein, putative [Ricinus communis]
           gi|223541279|gb|EEF42830.1| polyadenylate-binding
           protein, putative [Ricinus communis]
          Length = 632

 Score =  128 bits (321), Expect = 6e-28
 Identities = 61/98 (62%), Positives = 79/98 (80%)
 Frame = -2

Query: 294 KGYGFVQFETVDSSDAAINSLNNSTFDEKEISVCNFVKKTDRVSSSPDVKYTNLYMKNLD 115
           KG+GFVQFE+ DS+++AI  LN S   +K+I V  FVKK+DRV  SPD KYTNLY+KNLD
Sbjct: 141 KGHGFVQFESEDSANSAIEKLNGSIVGDKQIYVGKFVKKSDRVLPSPDAKYTNLYVKNLD 200

Query: 114 QELTEEYLKEKFSEFGKITNLVVSKDDNGNSRGFGFVN 1
             +TEE L+EKFSEFGKI ++ +++D+ G+SRGFGFVN
Sbjct: 201 PGITEELLQEKFSEFGKIVSVAIARDECGSSRGFGFVN 238



 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 38/109 (34%), Positives = 59/109 (54%), Gaps = 12/109 (11%)
 Frame = -2

Query: 294 KGYGFVQFETVDSSDAAINSLNNSTFDEKEISVCNFVKKTDRVS------------SSPD 151
           +G+GFV FE  D +  A+  +N +    K + V    K+ +R                  
Sbjct: 232 RGFGFVNFENPDDARWAMERMNGTELGSKVLYVGRAQKRAEREQILRRQFEEKRKEQITK 291

Query: 150 VKYTNLYMKNLDQELTEEYLKEKFSEFGKITNLVVSKDDNGNSRGFGFV 4
            K +N+Y+KN+D ++T+E L+E FS+ G IT+  + KDD G S+GFGFV
Sbjct: 292 FKGSNVYVKNIDDDVTDEELREHFSQCGTITSAKLMKDDKGRSKGFGFV 340