BLASTX nr result

ID: Coptis23_contig00043085 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00043085
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534272.1| ATP binding protein, putative [Ricinus commu...   129   3e-28
ref|XP_002277291.2| PREDICTED: probable inactive leucine-rich re...   128   6e-28
emb|CBI29900.3| unnamed protein product [Vitis vinifera]              128   6e-28
ref|XP_002323301.1| predicted protein [Populus trichocarpa] gi|2...   120   2e-25
ref|XP_003554189.1| PREDICTED: probable inactive leucine-rich re...   119   2e-25

>ref|XP_002534272.1| ATP binding protein, putative [Ricinus communis]
           gi|223525595|gb|EEF28109.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 654

 Score =  129 bits (324), Expect = 3e-28
 Identities = 68/101 (67%), Positives = 76/101 (75%)
 Frame = -3

Query: 303 ASKKQSSIQTVLSLGIGSDASPPCLSYLAPEARLSRNKLTQKCDVYSFGIVVLELLTGRL 124
           ASKKQ   QT ++  +GS  S PC  YLAPEAR   NK +QKCDVYSFGI+++ELLTGRL
Sbjct: 517 ASKKQYLNQTTVNPTMGSKISAPCNFYLAPEARGFSNKFSQKCDVYSFGIILMELLTGRL 576

Query: 123 PQAGPEKDYKELECYVRKAFREECPLSEIIDPALMHEVHAK 1
           P AG E D K LE  VRK FREE PLSEIIDPAL+ EVHAK
Sbjct: 577 PDAGSENDGKGLESLVRKVFREERPLSEIIDPALLSEVHAK 617


>ref|XP_002277291.2| PREDICTED: probable inactive leucine-rich repeat receptor-like
           protein kinase At1g66830-like [Vitis vinifera]
          Length = 640

 Score =  128 bits (321), Expect = 6e-28
 Identities = 65/101 (64%), Positives = 79/101 (78%)
 Frame = -3

Query: 303 ASKKQSSIQTVLSLGIGSDASPPCLSYLAPEARLSRNKLTQKCDVYSFGIVVLELLTGRL 124
           +SKKQ+S Q   +  +GS AS   ++YLAPEAR+S  + TQKCDVYSFGIV++E+LT RL
Sbjct: 503 SSKKQNSHQVSTNSVLGSKASANSIAYLAPEARVSGTRFTQKCDVYSFGIVLMEVLTARL 562

Query: 123 PQAGPEKDYKELECYVRKAFREECPLSEIIDPALMHEVHAK 1
           P AGPE D K LE  VRK FR+E PLSEIIDPAL+HEV+AK
Sbjct: 563 PDAGPENDGKGLESLVRKVFRDERPLSEIIDPALLHEVYAK 603


>emb|CBI29900.3| unnamed protein product [Vitis vinifera]
          Length = 739

 Score =  128 bits (321), Expect = 6e-28
 Identities = 65/101 (64%), Positives = 79/101 (78%)
 Frame = -3

Query: 303 ASKKQSSIQTVLSLGIGSDASPPCLSYLAPEARLSRNKLTQKCDVYSFGIVVLELLTGRL 124
           +SKKQ+S Q   +  +GS AS   ++YLAPEAR+S  + TQKCDVYSFGIV++E+LT RL
Sbjct: 602 SSKKQNSHQVSTNSVLGSKASANSIAYLAPEARVSGTRFTQKCDVYSFGIVLMEVLTARL 661

Query: 123 PQAGPEKDYKELECYVRKAFREECPLSEIIDPALMHEVHAK 1
           P AGPE D K LE  VRK FR+E PLSEIIDPAL+HEV+AK
Sbjct: 662 PDAGPENDGKGLESLVRKVFRDERPLSEIIDPALLHEVYAK 702


>ref|XP_002323301.1| predicted protein [Populus trichocarpa] gi|222867931|gb|EEF05062.1|
           predicted protein [Populus trichocarpa]
          Length = 652

 Score =  120 bits (300), Expect = 2e-25
 Identities = 66/101 (65%), Positives = 76/101 (75%)
 Frame = -3

Query: 303 ASKKQSSIQTVLSLGIGSDASPPCLSYLAPEARLSRNKLTQKCDVYSFGIVVLELLTGRL 124
           ASKKQ   QT+ S  +G   S P   YLAPEAR+S +K +QKCDVYSFGIV++ELLTGRL
Sbjct: 516 ASKKQYLNQTISS-AMGLKISAPSNIYLAPEARVSGSKFSQKCDVYSFGIVLMELLTGRL 574

Query: 123 PQAGPEKDYKELECYVRKAFREECPLSEIIDPALMHEVHAK 1
           P AG E D + LE  VRK F+EE PLSEIIDPAL+ EVHAK
Sbjct: 575 PGAGSENDGEGLESLVRKVFQEERPLSEIIDPALLSEVHAK 615


>ref|XP_003554189.1| PREDICTED: probable inactive leucine-rich repeat receptor-like
           protein kinase At1g66830-like [Glycine max]
          Length = 648

 Score =  119 bits (299), Expect = 2e-25
 Identities = 62/105 (59%), Positives = 75/105 (71%)
 Frame = -3

Query: 315 STDFASKKQSSIQTVLSLGIGSDASPPCLSYLAPEARLSRNKLTQKCDVYSFGIVVLELL 136
           ST  A K+ S  Q+ ++  I S  +     YLAPE R +  K TQKCDVYSFGIV+LELL
Sbjct: 508 STTMAPKRNSLNQSSITTAISSKVAASSNHYLAPEVRFTGGKFTQKCDVYSFGIVLLELL 567

Query: 135 TGRLPQAGPEKDYKELECYVRKAFREECPLSEIIDPALMHEVHAK 1
           TGR+P  GPE D K LE +VRKAF+EE PLS+IIDPAL+ EV+AK
Sbjct: 568 TGRMPDFGPENDDKVLESFVRKAFKEEQPLSDIIDPALIPEVYAK 612


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