BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00043082
         (232 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]              103   1e-20
emb|CAN68364.1| hypothetical protein VITISV_021899 [Vitis vinifera]    94   9e-18
gb|ABA94310.1| retrotransposon protein, putative, Ty3-gypsy subc...    92   4e-17
emb|CAN63649.1| hypothetical protein VITISV_037657 [Vitis vinifera]    92   6e-17
emb|CAN61340.1| hypothetical protein VITISV_007301 [Vitis vinifera]    91   1e-16

>gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]
          Length = 1384

 Score =  103 bits (258), Expect = 1e-20
 Identities = 45/71 (63%), Positives = 59/71 (83%)
 Frame = -1

Query: 232  IHCDNISAIALANNPIFHARTKHVEIDYHYIRELVINKVIDIKYLCTKDQLADIFTKGLS 53
            I CDNIS+I+LA+NP+FH+RTKH+E+DYHY+R+ V+ + + + Y+ T DQ ADIFTKGLS
Sbjct: 1293 IWCDNISSISLASNPVFHSRTKHIEVDYHYVRDKVVRQELAVSYVSTADQTADIFTKGLS 1352

Query: 52   TQRFHMLLSKL 20
            TQRF  L SKL
Sbjct: 1353 TQRFQFLASKL 1363


>emb|CAN68364.1| hypothetical protein VITISV_021899 [Vitis vinifera]
          Length = 431

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 42/77 (54%), Positives = 58/77 (75%)
 Frame = -1

Query: 232 IHCDNISAIALANNPIFHARTKHVEIDYHYIRELVINKVIDIKYLCTKDQLADIFTKGLS 53
           ++CDN+S   LA NPI H+R KHVEIDYH++RE V+ K +D+++L ++DQ+ADI TK LS
Sbjct: 245 LYCDNLSTTYLAANPILHSRAKHVEIDYHFVRERVLQKTLDVRFLPSEDQVADILTKSLS 304

Query: 52  TQRFHMLLSKLSFIPSP 2
           TQ F  L SKL+ +  P
Sbjct: 305 TQHFLHLRSKLTVLSRP 321


>gb|ABA94310.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1762

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 39/70 (55%), Positives = 55/70 (78%)
 Frame = -1

Query: 226  CDNISAIALANNPIFHARTKHVEIDYHYIRELVINKVIDIKYLCTKDQLADIFTKGLSTQ 47
            CDN+ A  L++NP+FHARTKH+EIDYH+++E V NK++DI+++ TKDQ+AD FTK LSTQ
Sbjct: 1689 CDNLGATYLSSNPVFHARTKHIEIDYHFVQERVANKMLDIRFIGTKDQIADGFTKALSTQ 1748

Query: 46   RFHMLLSKLS 17
                 +  L+
Sbjct: 1749 NLRHFMYNLN 1758


>emb|CAN63649.1| hypothetical protein VITISV_037657 [Vitis vinifera]
          Length = 1131

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 41/77 (53%), Positives = 57/77 (74%)
 Frame = -1

Query: 232  IHCDNISAIALANNPIFHARTKHVEIDYHYIRELVINKVIDIKYLCTKDQLADIFTKGLS 53
            ++ DN+S   LA NP+ H+R KHVEIDYH++RE V+ K +D+++L +KDQ+ DI TK LS
Sbjct: 1039 LYYDNLSTTYLATNPVLHSRAKHVEIDYHFVRERVLPKTLDVRFLPSKDQVVDILTKALS 1098

Query: 52   TQRFHMLLSKLSFIPSP 2
            TQRF  L SKL+ +  P
Sbjct: 1099 TQRFLHLRSKLTVLSRP 1115


>emb|CAN61340.1| hypothetical protein VITISV_007301 [Vitis vinifera]
          Length = 973

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 38/74 (51%), Positives = 56/74 (75%)
 Frame = -1

Query: 232  IHCDNISAIALANNPIFHARTKHVEIDYHYIRELVINKVIDIKYLCTKDQLADIFTKGLS 53
            ++CDN SA+ LA NP+FHARTKHVE+ YH+IRE V+ + +++K + +KDQ+AD+FTKGLS
Sbjct: 889  LYCDNQSAVRLAENPVFHARTKHVEVHYHFIREKVLEEEVELKQIKSKDQVADLFTKGLS 948

Query: 52   TQRFHMLLSKLSFI 11
              +F     +L  +
Sbjct: 949  GSKFECFCHQLGMV 962