BLASTX nr result

ID: Coptis23_contig00043080 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00043080
         (221 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525649.1| conserved hypothetical protein [Ricinus comm...   128   6e-28
ref|XP_002892388.1| hypothetical protein ARALYDRAFT_887933 [Arab...   124   6e-27
ref|NP_172202.1| uncharacterized protein [Arabidopsis thaliana] ...   123   1e-26
dbj|BAD94602.1| hypothetical protein [Arabidopsis thaliana]           123   1e-26
ref|XP_002299807.1| predicted protein [Populus trichocarpa] gi|2...   122   4e-26

>ref|XP_002525649.1| conserved hypothetical protein [Ricinus communis]
           gi|223535085|gb|EEF36767.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 491

 Score =  128 bits (321), Expect = 6e-28
 Identities = 61/73 (83%), Positives = 66/73 (90%)
 Frame = -1

Query: 221 AEGFAWSVSLKYIVSCGSLTLIIAPQYEDFLSRGLVPRLNYWPVSLSPDLCRSIKFAVDW 42
           AEGFAWSVSLKYI+SCGSL LII+PQYEDF SRGLVP  NYWPV+ S +LCRSIKFAVDW
Sbjct: 316 AEGFAWSVSLKYIISCGSLALIISPQYEDFFSRGLVPASNYWPVA-SDELCRSIKFAVDW 374

Query: 41  GNANPSVAEAIGK 3
           GNANPS AE+IGK
Sbjct: 375 GNANPSEAESIGK 387


>ref|XP_002892388.1| hypothetical protein ARALYDRAFT_887933 [Arabidopsis lyrata subsp.
           lyrata] gi|297338230|gb|EFH68647.1| hypothetical protein
           ARALYDRAFT_887933 [Arabidopsis lyrata subsp. lyrata]
          Length = 508

 Score =  124 bits (312), Expect = 6e-27
 Identities = 57/73 (78%), Positives = 66/73 (90%)
 Frame = -1

Query: 221 AEGFAWSVSLKYIVSCGSLTLIIAPQYEDFLSRGLVPRLNYWPVSLSPDLCRSIKFAVDW 42
           AEG+AWSVSLKYI+SCGS+TLII+P+YEDF SRGL+P+ NYWP+S   DLCRSIK+AVDW
Sbjct: 328 AEGYAWSVSLKYILSCGSMTLIISPEYEDFFSRGLLPKENYWPIS-PTDLCRSIKYAVDW 386

Query: 41  GNANPSVAEAIGK 3
           GNANPS AE IGK
Sbjct: 387 GNANPSQAETIGK 399


>ref|NP_172202.1| uncharacterized protein [Arabidopsis thaliana]
           gi|8954024|gb|AAF82198.1|AC067971_6 Contains similarity
           to an unknown protein T2J13.180 gi|6522568 from
           Arabidopsis thaliana BAC T2J13 gb|AL132967. ESTs
           gb|Z29835 and gb|Z29836 come from this gene [Arabidopsis
           thaliana] gi|332189973|gb|AEE28094.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 507

 Score =  123 bits (309), Expect = 1e-26
 Identities = 56/73 (76%), Positives = 66/73 (90%)
 Frame = -1

Query: 221 AEGFAWSVSLKYIVSCGSLTLIIAPQYEDFLSRGLVPRLNYWPVSLSPDLCRSIKFAVDW 42
           AEG+AWSVSLKYI+SCGS+TLII+P+YEDF SRGL+P+ NYWP+S   DLCRSIK+AVDW
Sbjct: 327 AEGYAWSVSLKYILSCGSMTLIISPEYEDFFSRGLLPKENYWPIS-PTDLCRSIKYAVDW 385

Query: 41  GNANPSVAEAIGK 3
           GN+NPS AE IGK
Sbjct: 386 GNSNPSEAETIGK 398


>dbj|BAD94602.1| hypothetical protein [Arabidopsis thaliana]
          Length = 507

 Score =  123 bits (309), Expect = 1e-26
 Identities = 56/73 (76%), Positives = 66/73 (90%)
 Frame = -1

Query: 221 AEGFAWSVSLKYIVSCGSLTLIIAPQYEDFLSRGLVPRLNYWPVSLSPDLCRSIKFAVDW 42
           AEG+AWSVSLKYI+SCGS+TLII+P+YEDF SRGL+P+ NYWP+S   DLCRSIK+AVDW
Sbjct: 327 AEGYAWSVSLKYILSCGSMTLIISPEYEDFFSRGLLPKENYWPIS-PTDLCRSIKYAVDW 385

Query: 41  GNANPSVAEAIGK 3
           GN+NPS AE IGK
Sbjct: 386 GNSNPSEAETIGK 398


>ref|XP_002299807.1| predicted protein [Populus trichocarpa] gi|222847065|gb|EEE84612.1|
           predicted protein [Populus trichocarpa]
          Length = 333

 Score =  122 bits (305), Expect = 4e-26
 Identities = 57/73 (78%), Positives = 63/73 (86%)
 Frame = -1

Query: 221 AEGFAWSVSLKYIVSCGSLTLIIAPQYEDFLSRGLVPRLNYWPVSLSPDLCRSIKFAVDW 42
           AEGFAWSVSLKYI+SCGSL LII+PQYEDF SRGL+P  NYWPVS S  LC+SIKFAVDW
Sbjct: 186 AEGFAWSVSLKYIISCGSLALIISPQYEDFFSRGLIPEKNYWPVS-SDGLCQSIKFAVDW 244

Query: 41  GNANPSVAEAIGK 3
           GN NP+ A+ IGK
Sbjct: 245 GNTNPTEAQKIGK 257


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