BLASTX nr result

ID: Coptis23_contig00043067 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00043067
         (302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313411.1| copper transporter [Populus trichocarpa] gi|...    86   2e-15
ref|XP_002313412.1| copper transporter [Populus trichocarpa] gi|...    83   2e-14
emb|CBI16033.3| unnamed protein product [Vitis vinifera]               79   4e-13
ref|XP_002280088.1| PREDICTED: copper transporter 1 [Vitis vinif...    79   4e-13
ref|XP_004145273.1| PREDICTED: copper transporter 1-like [Cucumi...    78   7e-13

>ref|XP_002313411.1| copper transporter [Populus trichocarpa]
           gi|118485983|gb|ABK94836.1| unknown [Populus
           trichocarpa] gi|222849819|gb|EEE87366.1| copper
           transporter [Populus trichocarpa]
          Length = 162

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 41/66 (62%), Positives = 55/66 (83%)
 Frame = +3

Query: 69  SHTRLTKGGGTNYVATALVQTFVHGVRVGLAFLVMLAVMSFNVGVFIAAVSGHIIGFLFF 248
           SH +L K G +N+VA  LVQT +H +RVGLA++VMLA+MSFN GVF+AAV+GH +GFLFF
Sbjct: 82  SHCQLMKPG-SNHVAAGLVQTLLHALRVGLAYMVMLAIMSFNGGVFLAAVAGHTLGFLFF 140

Query: 249 GTALFR 266
           G+ +F+
Sbjct: 141 GSRVFK 146


>ref|XP_002313412.1| copper transporter [Populus trichocarpa]
           gi|222849820|gb|EEE87367.1| copper transporter [Populus
           trichocarpa]
          Length = 155

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 40/66 (60%), Positives = 50/66 (75%)
 Frame = +3

Query: 69  SHTRLTKGGGTNYVATALVQTFVHGVRVGLAFLVMLAVMSFNVGVFIAAVSGHIIGFLFF 248
           SH RL K G  N VA  L+Q  +H VRVGLA++VMLAVMSFN GVFI AV+GH++GF  F
Sbjct: 73  SHCRLVKPGSNN-VAAGLIQALMHAVRVGLAYMVMLAVMSFNGGVFIVAVAGHLVGFFIF 131

Query: 249 GTALFR 266
           G+ +F+
Sbjct: 132 GSRVFK 137


>emb|CBI16033.3| unnamed protein product [Vitis vinifera]
          Length = 133

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 39/66 (59%), Positives = 51/66 (77%)
 Frame = +3

Query: 69  SHTRLTKGGGTNYVATALVQTFVHGVRVGLAFLVMLAVMSFNVGVFIAAVSGHIIGFLFF 248
           SHTR  K   TN +   L+QT ++G+RVGLA+LVMLAVMSFNVGVF+ A++G+  GFL F
Sbjct: 50  SHTRFIKST-TNKLVAGLLQTAMYGLRVGLAYLVMLAVMSFNVGVFLVAIAGYTTGFLLF 108

Query: 249 GTALFR 266
           G+ +FR
Sbjct: 109 GSRVFR 114


>ref|XP_002280088.1| PREDICTED: copper transporter 1 [Vitis vinifera]
           gi|321496082|gb|ADW93918.1| copper transporter [Vitis
           vinifera]
          Length = 173

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 39/66 (59%), Positives = 51/66 (77%)
 Frame = +3

Query: 69  SHTRLTKGGGTNYVATALVQTFVHGVRVGLAFLVMLAVMSFNVGVFIAAVSGHIIGFLFF 248
           SHTR  K   TN +   L+QT ++G+RVGLA+LVMLAVMSFNVGVF+ A++G+  GFL F
Sbjct: 90  SHTRFIKST-TNKLVAGLLQTAMYGLRVGLAYLVMLAVMSFNVGVFLVAIAGYTTGFLLF 148

Query: 249 GTALFR 266
           G+ +FR
Sbjct: 149 GSRVFR 154


>ref|XP_004145273.1| PREDICTED: copper transporter 1-like [Cucumis sativus]
           gi|449471515|ref|XP_004153332.1| PREDICTED: copper
           transporter 1-like [Cucumis sativus]
          Length = 130

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 39/70 (55%), Positives = 52/70 (74%)
 Frame = +3

Query: 69  SHTRLTKGGGTNYVATALVQTFVHGVRVGLAFLVMLAVMSFNVGVFIAAVSGHIIGFLFF 248
           SHT+ T     N  A  LVQT ++G+RVGLAF+VMLAVMS+NVG+ +AAV+G+ IGFL +
Sbjct: 46  SHTKFTTSAMDNLTA-GLVQTILYGIRVGLAFIVMLAVMSYNVGILLAAVTGYSIGFLVY 104

Query: 249 GTALFR*EKI 278
           G+ +F   KI
Sbjct: 105 GSKIFNRSKI 114


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