BLASTX nr result

ID: Coptis23_contig00043060 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00043060
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32873.3| unnamed protein product [Vitis vinifera]               55   4e-06
ref|XP_002278827.1| PREDICTED: zinc finger and SCAN domain-conta...    55   4e-06

>emb|CBI32873.3| unnamed protein product [Vitis vinifera]
          Length = 390

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 33/85 (38%), Positives = 42/85 (49%)
 Frame = -1

Query: 263 GCGKKFPFKHVTDIHEKTEEQIFFQVSWYMIHTNVENIRCLKRHSPFFYSRKLISWIFIV 84
           GCG +FPFKHV D HEKT   ++        H + E +    R  P              
Sbjct: 305 GCGMRFPFKHVRDNHEKTGCHVY-------THGDFEELDEQFRLRP-------------- 343

Query: 83  LQGGREKKCPTVETLLRKRVRPPGQ 9
            +GGR++K P +E LLRKRV PP Q
Sbjct: 344 -KGGRKRKSPPIEALLRKRVTPPSQ 367


>ref|XP_002278827.1| PREDICTED: zinc finger and SCAN domain-containing protein 10-like
           [Vitis vinifera]
          Length = 370

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 33/85 (38%), Positives = 42/85 (49%)
 Frame = -1

Query: 263 GCGKKFPFKHVTDIHEKTEEQIFFQVSWYMIHTNVENIRCLKRHSPFFYSRKLISWIFIV 84
           GCG +FPFKHV D HEKT   ++        H + E +    R  P              
Sbjct: 285 GCGMRFPFKHVRDNHEKTGCHVY-------THGDFEELDEQFRLRP-------------- 323

Query: 83  LQGGREKKCPTVETLLRKRVRPPGQ 9
            +GGR++K P +E LLRKRV PP Q
Sbjct: 324 -KGGRKRKSPPIEALLRKRVTPPSQ 347


Top