BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00043057
         (242 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 proteas...    99   3e-19
emb|CAA19715.1| putative protein [Arabidopsis thaliana] gi|72695...    99   3e-19
gb|AAF02855.1|AC009324_4 Similar to retrotransposon proteins [Ar...    94   9e-18
gb|AAD43604.1|AC005698_3 T3P18.3 [Arabidopsis thaliana]                94   1e-17
emb|CAC37623.1| copia-like polyprotein [Arabidopsis thaliana]          94   1e-17

>gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 protease homolog from
           Arabidopsis thaliana BAC gb|AF080119 and is a member of
           the reverse transcriptase family PF|00078 [Arabidopsis
           thaliana]
          Length = 1415

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 47/79 (59%), Positives = 59/79 (74%)
 Frame = +3

Query: 6   LENQLNTKIKVFRCDEGGECKSVVFKSFLQENGNSLQYSCPHTPQQNDIAERKHRHLLEL 185
           +ENQLNTKIKVF+ D GGE  S   K+ L E+G   + SCP+TPQQN +AERKHRHL+EL
Sbjct: 567 VENQLNTKIKVFQSDGGGEFVSNKLKTHLSEHGIHHRISCPYTPQQNGLAERKHRHLVEL 626

Query: 186 ARTMIAHSNVPPKYWVEIF 242
             +M+ HS+ P K+WVE F
Sbjct: 627 GLSMLFHSHTPQKFWVESF 645


>emb|CAA19715.1| putative protein [Arabidopsis thaliana] gi|7269574|emb|CAB79576.1|
           putative protein [Arabidopsis thaliana]
          Length = 1318

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 47/79 (59%), Positives = 57/79 (72%)
 Frame = +3

Query: 6   LENQLNTKIKVFRCDEGGECKSVVFKSFLQENGNSLQYSCPHTPQQNDIAERKHRHLLEL 185
           +ENQL+ KI VF+CD GGE  S  F   LQ +G   Q SCPHTPQQN +AERKHRHL+EL
Sbjct: 382 VENQLSQKISVFQCDGGGEFVSHKFLQHLQSHGIQQQLSCPHTPQQNGLAERKHRHLVEL 441

Query: 186 ARTMIAHSNVPPKYWVEIF 242
             +M+  S+VP K+WVE F
Sbjct: 442 GLSMLFQSHVPHKFWVEAF 460


>gb|AAF02855.1|AC009324_4 Similar to retrotransposon proteins [Arabidopsis thaliana]
          Length = 1522

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 44/79 (55%), Positives = 56/79 (70%)
 Frame = +3

Query: 6   LENQLNTKIKVFRCDEGGECKSVVFKSFLQENGNSLQYSCPHTPQQNDIAERKHRHLLEL 185
           +ENQL  KIK+F+CD GGE  S  F   LQ++G     SCP+TPQQN +AERKHRH++EL
Sbjct: 571 VENQLGHKIKIFQCDGGGEFISSQFLKHLQDHGIQQNMSCPYTPQQNGMAERKHRHIVEL 630

Query: 186 ARTMIAHSNVPPKYWVEIF 242
             +MI  S +P KYW+E F
Sbjct: 631 GLSMIFQSKLPLKYWLESF 649


>gb|AAD43604.1|AC005698_3 T3P18.3 [Arabidopsis thaliana]
          Length = 1309

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 44/79 (55%), Positives = 56/79 (70%)
 Frame = +3

Query: 6   LENQLNTKIKVFRCDEGGECKSVVFKSFLQENGNSLQYSCPHTPQQNDIAERKHRHLLEL 185
           +ENQL TKIK F+ D GGE  S   K   +E+G   + SCP+TPQQN +AERKHRHL+EL
Sbjct: 412 VENQLGTKIKEFQSDGGGEFTSNKLKEHFREHGIHHRISCPYTPQQNGVAERKHRHLVEL 471

Query: 186 ARTMIAHSNVPPKYWVEIF 242
             +M+ HS+ P K+WVE F
Sbjct: 472 GLSMLYHSHTPLKFWVEAF 490


>emb|CAC37623.1| copia-like polyprotein [Arabidopsis thaliana]
          Length = 1466

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 44/79 (55%), Positives = 56/79 (70%)
 Frame = +3

Query: 6   LENQLNTKIKVFRCDEGGECKSVVFKSFLQENGNSLQYSCPHTPQQNDIAERKHRHLLEL 185
           +ENQL TKIK F+ D GGE  S   K   +E+G   + SCP+TPQQN +AERKHRHL+EL
Sbjct: 569 VENQLGTKIKEFQSDGGGEFTSNKLKEHFREHGIHHRISCPYTPQQNGVAERKHRHLVEL 628

Query: 186 ARTMIAHSNVPPKYWVEIF 242
             +M+ HS+ P K+WVE F
Sbjct: 629 GLSMLYHSHTPLKFWVEAF 647