BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00043043
         (231 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234179.1| lateral suppressor protein [Solanum lycopers...    64   1e-08
gb|ACH47034.1| lateral suppressor protein [Nicotiana tabacum]          64   2e-08
ref|XP_002300599.1| GRAS family transcription factor LATERAL [Po...    60   2e-07
gb|AFH54535.1| GRAS family protein, partial [Dimocarpus longan]        58   7e-07
dbj|BAD42666.1| lateral suppressor-like protein [Daucus carota]        56   3e-06

>ref|NP_001234179.1| lateral suppressor protein [Solanum lycopersicum]
           gi|4160441|gb|AAD05242.1| lateral suppressor protein
           [Solanum lycopersicum] gi|13620224|emb|CAC36399.1|
           lateral suppressor [Solanum lycopersicum]
          Length = 428

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 36/73 (49%), Positives = 47/73 (64%)
 Frame = +2

Query: 8   SPAAHTRQLLITCAELLSQSNFPAAHRLVXXXXXXXXXXXXXXXERLVHQFAKALSIRLN 187
           SPA   RQLLI+CAEL+SQS+F AA RL+               ERLVHQF +ALS+RLN
Sbjct: 44  SPAIQIRQLLISCAELISQSDFSAAKRLL-TILSTNSSPFGDSTERLVHQFTRALSLRLN 102

Query: 188 RTVSASAPPMISP 226
           R +S++    ++P
Sbjct: 103 RYISSTTNHFMTP 115


>gb|ACH47034.1| lateral suppressor protein [Nicotiana tabacum]
          Length = 407

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 38/74 (51%), Positives = 49/74 (66%)
 Frame = +2

Query: 8   SPAAHTRQLLITCAELLSQSNFPAAHRLVXXXXXXXXXXXXXXXERLVHQFAKALSIRLN 187
           SPA   RQLLI+CAEL+S+S+F AA+RL+               ERLVHQF +ALS+RLN
Sbjct: 27  SPAIQIRQLLISCAELISRSDFSAANRLL-TILSTNSSPFGDSTERLVHQFTRALSLRLN 85

Query: 188 RTVSASAPPMISPS 229
           R +S SA   ++PS
Sbjct: 86  RYIS-SATNFLTPS 98


>ref|XP_002300599.1| GRAS family transcription factor LATERAL [Populus trichocarpa]
           gi|222847857|gb|EEE85404.1| GRAS family transcription
           factor LATERAL [Populus trichocarpa]
          Length = 438

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 35/78 (44%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
 Frame = +2

Query: 2   PPS--PAAHTRQLLITCAELLSQSNFPAAHRLV-XXXXXXXXXXXXXXXERLVHQFAKAL 172
           PP+   A HTRQLL++CA+L+SQS+F AA RL+                ERLVHQF +AL
Sbjct: 21  PPTLTTAFHTRQLLVSCADLISQSDFSAAQRLLSHLLSTYNSSPYGDSTERLVHQFVRAL 80

Query: 173 SIRLNRTVSASAPPMISP 226
           S+RLNR  + +     +P
Sbjct: 81  SLRLNRHANPARSTTTAP 98


>gb|AFH54535.1| GRAS family protein, partial [Dimocarpus longan]
          Length = 449

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 32/62 (51%), Positives = 40/62 (64%)
 Frame = +2

Query: 5   PSPAAHTRQLLITCAELLSQSNFPAAHRLVXXXXXXXXXXXXXXXERLVHQFAKALSIRL 184
           P+ A   RQLLI+CAEL+SQS+F AA RL+               ERL+HQF +ALS+RL
Sbjct: 37  PAAAIQMRQLLISCAELVSQSDFSAADRLI-SILSANSSPYGDSTERLIHQFVRALSLRL 95

Query: 185 NR 190
           NR
Sbjct: 96  NR 97


>dbj|BAD42666.1| lateral suppressor-like protein [Daucus carota]
          Length = 431

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 31/66 (46%), Positives = 41/66 (62%)
 Frame = +2

Query: 8   SPAAHTRQLLITCAELLSQSNFPAAHRLVXXXXXXXXXXXXXXXERLVHQFAKALSIRLN 187
           SP+ H RQLLI+CAE +S+ +F  AHRL+               ERLVHQF+KALS+RL+
Sbjct: 30  SPSVHMRQLLISCAEHISRCDFYGAHRLI-NILSANSSPCGDSTERLVHQFSKALSLRLH 88

Query: 188 RTVSAS 205
              + S
Sbjct: 89  SFAATS 94