BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00043041
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI35789.3| unnamed protein product [Vitis vinifera]              127   7e-28
ref|XP_002271048.1| PREDICTED: pentatricopeptide repeat-containi...   127   7e-28
emb|CAN79606.1| hypothetical protein VITISV_027500 [Vitis vinifera]   127   7e-28
ref|XP_002322098.1| predicted protein [Populus trichocarpa] gi|2...   127   1e-27
ref|XP_003551582.1| PREDICTED: pentatricopeptide repeat-containi...   122   4e-26

>emb|CBI35789.3| unnamed protein product [Vitis vinifera]
          Length = 912

 Score =  127 bits (320), Expect = 7e-28
 Identities = 59/101 (58%), Positives = 76/101 (75%)
 Frame = -3

Query: 306 SLNLNSITHALCDSKRYNEAHQRFLLSIASQSVPDARTCNVIISRLLAAKDPTQTMRVIR 127
           SLNL+SI HALCD+ R++EAH R LLS AS  VPD RTCNV+I+RLL ++ P  T+ V R
Sbjct: 328 SLNLSSIIHALCDANRFSEAHHRLLLSFASHCVPDQRTCNVLIARLLDSRTPHATLHVFR 387

Query: 126 RLVVAKPGYIPCLIIYNRIIHQFCLLGLPNEAYRLFYDMKS 4
            L+ A+P ++P LI YNR+IHQ C    PNEA+ LF+DM+S
Sbjct: 388 GLIAARPEFVPSLINYNRLIHQLCSFSQPNEAHGLFFDMRS 428


>ref|XP_002271048.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g18020-like [Vitis vinifera]
          Length = 680

 Score =  127 bits (320), Expect = 7e-28
 Identities = 59/101 (58%), Positives = 76/101 (75%)
 Frame = -3

Query: 306 SLNLNSITHALCDSKRYNEAHQRFLLSIASQSVPDARTCNVIISRLLAAKDPTQTMRVIR 127
           SLNL+SI HALCD+ R++EAH R LLS AS  VPD RTCNV+I+RLL ++ P  T+ V R
Sbjct: 96  SLNLSSIIHALCDANRFSEAHHRLLLSFASHCVPDQRTCNVLIARLLDSRTPHATLHVFR 155

Query: 126 RLVVAKPGYIPCLIIYNRIIHQFCLLGLPNEAYRLFYDMKS 4
            L+ A+P ++P LI YNR+IHQ C    PNEA+ LF+DM+S
Sbjct: 156 GLIAARPEFVPSLINYNRLIHQLCSFSQPNEAHGLFFDMRS 196


>emb|CAN79606.1| hypothetical protein VITISV_027500 [Vitis vinifera]
          Length = 959

 Score =  127 bits (320), Expect = 7e-28
 Identities = 59/101 (58%), Positives = 76/101 (75%)
 Frame = -3

Query: 306 SLNLNSITHALCDSKRYNEAHQRFLLSIASQSVPDARTCNVIISRLLAAKDPTQTMRVIR 127
           SLNL+SI HALCD+ R++EAH R LLS AS  VPD RTCNV+I+RLL ++ P  T+ V R
Sbjct: 386 SLNLSSIIHALCDANRFSEAHHRLLLSFASHCVPDQRTCNVLIARLLDSRTPHATLHVFR 445

Query: 126 RLVVAKPGYIPCLIIYNRIIHQFCLLGLPNEAYRLFYDMKS 4
            L+ A+P ++P LI YNR+IHQ C    PNEA+ LF+DM+S
Sbjct: 446 GLIAARPEFVPSLINYNRLIHQLCSFSQPNEAHGLFFDMRS 486


>ref|XP_002322098.1| predicted protein [Populus trichocarpa] gi|222869094|gb|EEF06225.1|
           predicted protein [Populus trichocarpa]
          Length = 668

 Score =  127 bits (318), Expect = 1e-27
 Identities = 57/99 (57%), Positives = 76/99 (76%)
 Frame = -3

Query: 306 SLNLNSITHALCDSKRYNEAHQRFLLSIASQSVPDARTCNVIISRLLAAKDPTQTMRVIR 127
           SLNL+SI H LCD+ R+NEAHQR ++ + S  VPD RTCNV+++RLL +KDP +T+ VI 
Sbjct: 85  SLNLSSIIHGLCDANRFNEAHQRLIIFLTSLCVPDERTCNVLVARLLHSKDPFRTLNVIH 144

Query: 126 RLVVAKPGYIPCLIIYNRIIHQFCLLGLPNEAYRLFYDM 10
           RL+  KP ++P LI YNR+I QFC + LPN A+R+ YDM
Sbjct: 145 RLIEFKPEFVPSLINYNRLIDQFCSVSLPNVAHRMLYDM 183


>ref|XP_003551582.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g18020-like [Glycine max]
          Length = 650

 Score =  122 bits (305), Expect = 4e-26
 Identities = 52/99 (52%), Positives = 79/99 (79%)
 Frame = -3

Query: 300 NLNSITHALCDSKRYNEAHQRFLLSIASQSVPDARTCNVIISRLLAAKDPTQTMRVIRRL 121
           N+ +I H+LC+S R++EAH RF LS+AS S+PD RTCNV+++RLLA++ P  T R++R L
Sbjct: 49  NIATIIHSLCNSHRFSEAHHRFSLSLASASLPDERTCNVLLARLLASRTPRATWRLLRSL 108

Query: 120 VVAKPGYIPCLIIYNRIIHQFCLLGLPNEAYRLFYDMKS 4
           + +KPG++P L+ YNR++ QFC   LP +A+RLF+DM++
Sbjct: 109 IASKPGFVPSLVNYNRLMDQFCGAHLPRDAHRLFFDMRN 147