BLASTX nr result

ID: Coptis23_contig00042976 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00042976
         (327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319567.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-09
gb|ABK96485.1| unknown [Populus trichocarpa x Populus deltoides]       67   1e-09
ref|XP_002512326.1| conserved hypothetical protein [Ricinus comm...    65   6e-09
ref|XP_002328549.1| predicted protein [Populus trichocarpa] gi|2...    57   1e-06
ref|XP_003553736.1| PREDICTED: uncharacterized protein LOC100815...    55   6e-06

>ref|XP_002319567.1| predicted protein [Populus trichocarpa] gi|222857943|gb|EEE95490.1|
           predicted protein [Populus trichocarpa]
          Length = 311

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 47/126 (37%), Positives = 68/126 (53%), Gaps = 20/126 (15%)
 Frame = -3

Query: 319 AGLISITTDH--QKPTNILEAASIKPPTNTTSPTA------------KKDSSMLDEISSA 182
           AGL++ TT     K  NILE+ +IKP + +T+P              KKD   +  +   
Sbjct: 51  AGLMTATTCDPIHKTPNILESTTIKPSSPSTTPPHSPSPPSSIASIFKKDPRGIGFLDDI 110

Query: 181 TGLVDGLSSCTESLGFESSEQME-DSILETSTRSKTLVKPVEDRVRCRDL-----VSKFP 20
            G +DGL SCTESLGFESS++   D  +E  +R ++ +     +V+CR L       +FP
Sbjct: 111 GGGIDGLMSCTESLGFESSDERRFDDEIELCSRERSKI----TKVKCRKLGEKKEAKRFP 166

Query: 19  PPLSSM 2
           PPLSS+
Sbjct: 167 PPLSSL 172


>gb|ABK96485.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 310

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 48/126 (38%), Positives = 67/126 (53%), Gaps = 20/126 (15%)
 Frame = -3

Query: 319 AGLISITTDH--QKPTNILEAASIKPPTNTTSPTA------------KKDSSMLDEISSA 182
           AGLI+ TT     K  NILE+ +IKP + +T+P              KKD   +  +   
Sbjct: 51  AGLITATTCDPIHKTPNILESTTIKPSSPSTTPPHSPSPPSSIASIFKKDPRGIGFLDDI 110

Query: 181 TGLVDGLSSCTESLGFESSEQME-DSILETSTRSKTLVKPVEDRVRCR-----DLVSKFP 20
            G +DGL SCTESLGFESS++   D  +E  +R ++ +     +V+CR         KFP
Sbjct: 111 GGGIDGLMSCTESLGFESSDERRFDDEIELCSRERSTI----TKVKCRKPGEKKEAKKFP 166

Query: 19  PPLSSM 2
           PPLSS+
Sbjct: 167 PPLSSL 172


>ref|XP_002512326.1| conserved hypothetical protein [Ricinus communis]
           gi|223548287|gb|EEF49778.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 328

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 46/123 (37%), Positives = 67/123 (54%), Gaps = 15/123 (12%)
 Frame = -3

Query: 325 TSAGLISITTD----HQKPTNILEAASIKPPTNTTSPTA--------KKDSSMLDEISSA 182
           TS+GL  IT      ++ P N+LE+ + K P+   SP+         KKD   +  +   
Sbjct: 42  TSSGLGLITAADIDAYKTPPNVLESTTFKSPSPPPSPSLPPTPLSFFKKDPGGIGFVDDV 101

Query: 181 TGLVDGLSSCTESLGFESSEQ--MEDSILETSTRSKTLVKPVE-DRVRCRDLVSKFPPPL 11
            G V+GL SCTESLGFES ++  ++D I E  +R+++    V   +   R  V KFPPPL
Sbjct: 102 GGGVNGLMSCTESLGFESCDERRIDDEIDELCSRTRSSTTKVNWKKFGERREVKKFPPPL 161

Query: 10  SSM 2
           SS+
Sbjct: 162 SSL 164


>ref|XP_002328549.1| predicted protein [Populus trichocarpa] gi|222838264|gb|EEE76629.1|
           predicted protein [Populus trichocarpa]
          Length = 325

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 47/127 (37%), Positives = 63/127 (49%), Gaps = 22/127 (17%)
 Frame = -3

Query: 316 GLISITTDHQ--KPTNILEAASIKPPTNTTSPTA--------------KKDSSMLDEISS 185
           GLI+ TT     K  NILE+ +IK  T  T+P +              KK  S +  +  
Sbjct: 48  GLITTTTCESVHKTPNILESTTIKSSTPLTTPPSSPPPPPPPSIASIFKKGPSGIGFLDD 107

Query: 184 ATGLVDGLSSCTESLGFESSEQME-DSILETSTRSKTLVKPVEDRVRCRDL-----VSKF 23
             G V+GL SCTESLGFESS++   D   E  +R      P  ++V+ R+        KF
Sbjct: 108 IGGGVNGLMSCTESLGFESSDERRFDDDNELCSRE----IPTINKVKWREFGEKKEAKKF 163

Query: 22  PPPLSSM 2
           PPPLSS+
Sbjct: 164 PPPLSSL 170


>ref|XP_003553736.1| PREDICTED: uncharacterized protein LOC100815022 [Glycine max]
          Length = 243

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 4/109 (3%)
 Frame = -3

Query: 316 GLISITTDHQKPTNILEAASIKPPTNTTSPTAKKDSSMLDEISSATGLVDGLSSCTESLG 137
           GL   T +  +P N+LE+A ++P       TA   S     I S   +V GL+SCTESLG
Sbjct: 39  GLGLATREAHRPPNVLESAMLRP-------TAPPPSEKRVIIGSVDDVVTGLASCTESLG 91

Query: 136 FESSEQM----EDSILETSTRSKTLVKPVEDRVRCRDLVSKFPPPLSSM 2
           FESS+++    ++   E       + +    +   R  V  FPPPLSS+
Sbjct: 92  FESSDEIHNNNDNCCDEKENCDDEIWRRRTMKAEGRGKVRSFPPPLSSL 140


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