BLASTX nr result
ID: Coptis23_contig00042967
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00042967
(312 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002269533.2| PREDICTED: pentatricopeptide repeat-containi... 162 3e-38
emb|CBI31095.3| unnamed protein product [Vitis vinifera] 162 3e-38
dbj|BAD26238.1| putative pentatricopeptide (PPR) repeat-containi... 157 1e-36
gb|EEE56380.1| hypothetical protein OsJ_05522 [Oryza sativa Japo... 157 1e-36
ref|NP_001046005.1| Os02g0167200 [Oryza sativa Japonica Group] g... 157 1e-36
>ref|XP_002269533.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g20770-like [Vitis vinifera]
Length = 847
Score = 162 bits (409), Expect = 3e-38
Identities = 75/104 (72%), Positives = 87/104 (83%)
Frame = +1
Query: 1 GRQIHGQIVKDGYTSDVYVGSALIDMYSKCGNVDEARQFFEGMNEKNTVSWNEMIHGYAQ 180
GRQ+H QI ++GY +D +VGSALIDMYSKCG+VD AR F+ M KNTV+WNEMIHGYAQ
Sbjct: 539 GRQVHSQIAREGYMNDAFVGSALIDMYSKCGDVDAARWVFDMMLGKNTVTWNEMIHGYAQ 598
Query: 181 NGCGDMAVEIFEDMIRQGEKPDTITFIAVLTACSHSGLVDIGTR 312
NGCGD AV ++EDMI GEKPD ITF+AVLTACSHSGLVD G +
Sbjct: 599 NGCGDEAVLLYEDMIGSGEKPDGITFVAVLTACSHSGLVDTGIK 642
Score = 90.9 bits (224), Expect = 1e-16
Identities = 42/102 (41%), Positives = 63/102 (61%)
Frame = +1
Query: 1 GRQIHGQIVKDGYTSDVYVGSALIDMYSKCGNVDEARQFFEGMNEKNTVSWNEMIHGYAQ 180
G+Q+H +K G+ SD+++ ++L+DMY+K GN+D A F M E + VSWN MI GY Q
Sbjct: 271 GQQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQ 330
Query: 181 NGCGDMAVEIFEDMIRQGEKPDTITFIAVLTACSHSGLVDIG 306
A+E + M G +PD IT++ +L AC SG ++ G
Sbjct: 331 KSQSSKAIEYLQRMQYHGFEPDEITYVNMLVACIKSGDIEAG 372
Score = 72.4 bits (176), Expect = 4e-11
Identities = 34/94 (36%), Positives = 53/94 (56%)
Frame = +1
Query: 1 GRQIHGQIVKDGYTSDVYVGSALIDMYSKCGNVDEARQFFEGMNEKNTVSWNEMIHGYAQ 180
GRQ+H K + +D+Y+ S LI MYSKCG V+ A++ F+ + E + V WN M+ G +
Sbjct: 438 GRQVHAVSQKAVFRTDIYLASGLIGMYSKCGKVEMAKRIFDRIAELDIVCWNSMMAGLSL 497
Query: 181 NGCGDMAVEIFEDMIRQGEKPDTITFIAVLTACS 282
N A F+ M +G P ++ VL+ C+
Sbjct: 498 NSLDKEAFTFFKKMREKGMFPSQFSYATVLSCCA 531
Score = 68.6 bits (166), Expect = 5e-10
Identities = 36/102 (35%), Positives = 58/102 (56%)
Frame = +1
Query: 1 GRQIHGQIVKDGYTSDVYVGSALIDMYSKCGNVDEARQFFEGMNEKNTVSWNEMIHGYAQ 180
GR+ HG +K G +++YVG+AL+ MY+KC + +A Q F + E N VS+ M+ G A
Sbjct: 156 GRRCHGISIKIGLDNNIYVGNALLGMYAKCRCIGDAIQAFGDVPEPNEVSFTAMMGGLAD 215
Query: 181 NGCGDMAVEIFEDMIRQGEKPDTITFIAVLTACSHSGLVDIG 306
+ + A +F M+R D+++ +VL CS G + G
Sbjct: 216 SDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFG 257
Score = 60.1 bits (144), Expect = 2e-07
Identities = 30/86 (34%), Positives = 47/86 (54%)
Frame = +1
Query: 46 DVYVGSALIDMYSKCGNVDEARQFFEGMNEKNTVSWNEMIHGYAQNGCGDMAVEIFEDMI 225
D+Y +A++ Y K +++A F M E+N VSWN +I +NG A+ ++ M
Sbjct: 70 DIYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGFEQKALGVYYRMS 129
Query: 226 RQGEKPDTITFIAVLTACSHSGLVDI 303
R+G P T +VL+AC LVD+
Sbjct: 130 REGFVPTHFTLASVLSAC--GALVDV 153
>emb|CBI31095.3| unnamed protein product [Vitis vinifera]
Length = 768
Score = 162 bits (409), Expect = 3e-38
Identities = 75/104 (72%), Positives = 87/104 (83%)
Frame = +1
Query: 1 GRQIHGQIVKDGYTSDVYVGSALIDMYSKCGNVDEARQFFEGMNEKNTVSWNEMIHGYAQ 180
GRQ+H QI ++GY +D +VGSALIDMYSKCG+VD AR F+ M KNTV+WNEMIHGYAQ
Sbjct: 510 GRQVHSQIAREGYMNDAFVGSALIDMYSKCGDVDAARWVFDMMLGKNTVTWNEMIHGYAQ 569
Query: 181 NGCGDMAVEIFEDMIRQGEKPDTITFIAVLTACSHSGLVDIGTR 312
NGCGD AV ++EDMI GEKPD ITF+AVLTACSHSGLVD G +
Sbjct: 570 NGCGDEAVLLYEDMIGSGEKPDGITFVAVLTACSHSGLVDTGIK 613
Score = 90.9 bits (224), Expect = 1e-16
Identities = 42/102 (41%), Positives = 63/102 (61%)
Frame = +1
Query: 1 GRQIHGQIVKDGYTSDVYVGSALIDMYSKCGNVDEARQFFEGMNEKNTVSWNEMIHGYAQ 180
G+Q+H +K G+ SD+++ ++L+DMY+K GN+D A F M E + VSWN MI GY Q
Sbjct: 242 GQQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQ 301
Query: 181 NGCGDMAVEIFEDMIRQGEKPDTITFIAVLTACSHSGLVDIG 306
A+E + M G +PD IT++ +L AC SG ++ G
Sbjct: 302 KSQSSKAIEYLQRMQYHGFEPDEITYVNMLVACIKSGDIEAG 343
Score = 72.4 bits (176), Expect = 4e-11
Identities = 34/94 (36%), Positives = 53/94 (56%)
Frame = +1
Query: 1 GRQIHGQIVKDGYTSDVYVGSALIDMYSKCGNVDEARQFFEGMNEKNTVSWNEMIHGYAQ 180
GRQ+H K + +D+Y+ S LI MYSKCG V+ A++ F+ + E + V WN M+ G +
Sbjct: 409 GRQVHAVSQKAVFRTDIYLASGLIGMYSKCGKVEMAKRIFDRIAELDIVCWNSMMAGLSL 468
Query: 181 NGCGDMAVEIFEDMIRQGEKPDTITFIAVLTACS 282
N A F+ M +G P ++ VL+ C+
Sbjct: 469 NSLDKEAFTFFKKMREKGMFPSQFSYATVLSCCA 502
Score = 68.6 bits (166), Expect = 5e-10
Identities = 36/102 (35%), Positives = 58/102 (56%)
Frame = +1
Query: 1 GRQIHGQIVKDGYTSDVYVGSALIDMYSKCGNVDEARQFFEGMNEKNTVSWNEMIHGYAQ 180
GR+ HG +K G +++YVG+AL+ MY+KC + +A Q F + E N VS+ M+ G A
Sbjct: 127 GRRCHGISIKIGLDNNIYVGNALLGMYAKCRCIGDAIQAFGDVPEPNEVSFTAMMGGLAD 186
Query: 181 NGCGDMAVEIFEDMIRQGEKPDTITFIAVLTACSHSGLVDIG 306
+ + A +F M+R D+++ +VL CS G + G
Sbjct: 187 SDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFG 228
>dbj|BAD26238.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group] gi|218190136|gb|EEC72563.1|
hypothetical protein OsI_05996 [Oryza sativa Indica
Group]
Length = 803
Score = 157 bits (396), Expect = 1e-36
Identities = 72/100 (72%), Positives = 84/100 (84%)
Frame = +1
Query: 1 GRQIHGQIVKDGYTSDVYVGSALIDMYSKCGNVDEARQFFEGMNEKNTVSWNEMIHGYAQ 180
GRQIH Q++KDGY +VYVGSALIDMY+KCGN+D+AR FF+ M KN V+WNEMIHGYAQ
Sbjct: 537 GRQIHAQVMKDGYDQNVYVGSALIDMYAKCGNMDDARLFFDTMMMKNIVAWNEMIHGYAQ 596
Query: 181 NGCGDMAVEIFEDMIRQGEKPDTITFIAVLTACSHSGLVD 300
NG GD AVE+FE M+ +KPD +TFIAVLT CSHSGLVD
Sbjct: 597 NGLGDKAVELFEYMLTTEQKPDAVTFIAVLTGCSHSGLVD 636
Score = 80.5 bits (197), Expect = 1e-13
Identities = 38/93 (40%), Positives = 58/93 (62%)
Frame = +1
Query: 1 GRQIHGQIVKDGYTSDVYVGSALIDMYSKCGNVDEARQFFEGMNEKNTVSWNEMIHGYAQ 180
G+ IH +V+ G+ SD +VG++LIDMY+KC +DEA + FE + VSWN +I G+ Q
Sbjct: 269 GQAIHALVVRKGFGSDQHVGNSLIDMYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQ 328
Query: 181 NGCGDMAVEIFEDMIRQGEKPDTITFIAVLTAC 279
G AVE+ M G +P+ +T+ +L +C
Sbjct: 329 EGSCAKAVEVLSLMQEAGFEPNEVTYSNLLASC 361
Score = 75.9 bits (185), Expect = 3e-12
Identities = 40/100 (40%), Positives = 59/100 (59%)
Frame = +1
Query: 1 GRQIHGQIVKDGYTSDVYVGSALIDMYSKCGNVDEARQFFEGMNEKNTVSWNEMIHGYAQ 180
GR+ HG VK G ++ +V +AL+ MY+KCG+V +A + F GM N VS+ M+ G AQ
Sbjct: 160 GRRCHGVAVKVGLDANQFVENALLGMYTKCGSVGDAVRLFYGMARPNEVSFTAMMGGLAQ 219
Query: 181 NGCGDMAVEIFEDMIRQGEKPDTITFIAVLTACSHSGLVD 300
G D A+ +F M R G D ++ +VL AC+ + D
Sbjct: 220 TGSIDDALRLFARMCRSGVPVDPVSVSSVLGACAQACATD 259
Score = 72.8 bits (177), Expect = 3e-11
Identities = 34/102 (33%), Positives = 54/102 (52%)
Frame = +1
Query: 1 GRQIHGQIVKDGYTSDVYVGSALIDMYSKCGNVDEARQFFEGMNEKNTVSWNEMIHGYAQ 180
GRQ+H V+ +D++V S L+DMYSKCG + AR F M E++ V WN +I G
Sbjct: 436 GRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARSIFNKMTERDVVCWNSIISGLTI 495
Query: 181 NGCGDMAVEIFEDMIRQGEKPDTITFIAVLTACSHSGLVDIG 306
+ A + F+ M G P ++ +++ +CS + G
Sbjct: 496 HSLNKEAFDFFKQMRENGIMPTESSYASMINSCSRLSSIPHG 537
Score = 54.3 bits (129), Expect = 1e-05
Identities = 26/91 (28%), Positives = 45/91 (49%)
Frame = +1
Query: 34 GYTSDVYVGSALIDMYSKCGNVDEARQFFEGMNEKNTVSWNEMIHGYAQNGCGDMAVEIF 213
G+ + S L+ K +V AR F+ ++ + +WN ++ GY Q +E+F
Sbjct: 346 GFEPNEVTYSNLLASCIKARDVHSARAMFDKISRPSVTTWNTLLSGYCQEEQHQDTIELF 405
Query: 214 EDMIRQGEKPDTITFIAVLTACSHSGLVDIG 306
M Q +PD T +L++CS G++D G
Sbjct: 406 RRMQHQNVQPDRTTLAVILSSCSKLGILDFG 436
>gb|EEE56380.1| hypothetical protein OsJ_05522 [Oryza sativa Japonica Group]
Length = 518
Score = 157 bits (396), Expect = 1e-36
Identities = 72/100 (72%), Positives = 84/100 (84%)
Frame = +1
Query: 1 GRQIHGQIVKDGYTSDVYVGSALIDMYSKCGNVDEARQFFEGMNEKNTVSWNEMIHGYAQ 180
GRQIH Q++KDGY +VYVGSALIDMY+KCGN+D+AR FF+ M KN V+WNEMIHGYAQ
Sbjct: 244 GRQIHAQVMKDGYDQNVYVGSALIDMYAKCGNMDDARLFFDTMMMKNIVAWNEMIHGYAQ 303
Query: 181 NGCGDMAVEIFEDMIRQGEKPDTITFIAVLTACSHSGLVD 300
NG GD AVE+FE M+ +KPD +TFIAVLT CSHSGLVD
Sbjct: 304 NGLGDKAVELFEYMLTTEQKPDAVTFIAVLTGCSHSGLVD 343
Score = 72.8 bits (177), Expect = 3e-11
Identities = 34/102 (33%), Positives = 54/102 (52%)
Frame = +1
Query: 1 GRQIHGQIVKDGYTSDVYVGSALIDMYSKCGNVDEARQFFEGMNEKNTVSWNEMIHGYAQ 180
GRQ+H V+ +D++V S L+DMYSKCG + AR F M E++ V WN +I G
Sbjct: 143 GRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARSIFNKMTERDVVCWNSIISGLTI 202
Query: 181 NGCGDMAVEIFEDMIRQGEKPDTITFIAVLTACSHSGLVDIG 306
+ A + F+ M G P ++ +++ +CS + G
Sbjct: 203 HSLNKEAFDFFKQMRENGIMPTESSYASMINSCSRLSSIPHG 244
Score = 54.7 bits (130), Expect = 8e-06
Identities = 26/68 (38%), Positives = 39/68 (57%)
Frame = +1
Query: 76 MYSKCGNVDEARQFFEGMNEKNTVSWNEMIHGYAQNGCGDMAVEIFEDMIRQGEKPDTIT 255
MY+KC +DEA + FE + VSWN +I G+ Q G AVE+ M G +P+ +T
Sbjct: 1 MYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVEVLSLMQEAGFEPNEVT 60
Query: 256 FIAVLTAC 279
+ +L +C
Sbjct: 61 YSNLLASC 68
Score = 54.3 bits (129), Expect = 1e-05
Identities = 26/91 (28%), Positives = 45/91 (49%)
Frame = +1
Query: 34 GYTSDVYVGSALIDMYSKCGNVDEARQFFEGMNEKNTVSWNEMIHGYAQNGCGDMAVEIF 213
G+ + S L+ K +V AR F+ ++ + +WN ++ GY Q +E+F
Sbjct: 53 GFEPNEVTYSNLLASCIKARDVHSARAMFDKISRPSVTTWNTLLSGYCQEEQHQDTIELF 112
Query: 214 EDMIRQGEKPDTITFIAVLTACSHSGLVDIG 306
M Q +PD T +L++CS G++D G
Sbjct: 113 RRMQHQNVQPDRTTLAVILSSCSKLGILDFG 143
>ref|NP_001046005.1| Os02g0167200 [Oryza sativa Japonica Group]
gi|113535536|dbj|BAF07919.1| Os02g0167200, partial
[Oryza sativa Japonica Group]
Length = 526
Score = 157 bits (396), Expect = 1e-36
Identities = 72/100 (72%), Positives = 84/100 (84%)
Frame = +1
Query: 1 GRQIHGQIVKDGYTSDVYVGSALIDMYSKCGNVDEARQFFEGMNEKNTVSWNEMIHGYAQ 180
GRQIH Q++KDGY +VYVGSALIDMY+KCGN+D+AR FF+ M KN V+WNEMIHGYAQ
Sbjct: 260 GRQIHAQVMKDGYDQNVYVGSALIDMYAKCGNMDDARLFFDTMMMKNIVAWNEMIHGYAQ 319
Query: 181 NGCGDMAVEIFEDMIRQGEKPDTITFIAVLTACSHSGLVD 300
NG GD AVE+FE M+ +KPD +TFIAVLT CSHSGLVD
Sbjct: 320 NGLGDKAVELFEYMLTTEQKPDAVTFIAVLTGCSHSGLVD 359
Score = 72.8 bits (177), Expect = 3e-11
Identities = 34/102 (33%), Positives = 54/102 (52%)
Frame = +1
Query: 1 GRQIHGQIVKDGYTSDVYVGSALIDMYSKCGNVDEARQFFEGMNEKNTVSWNEMIHGYAQ 180
GRQ+H V+ +D++V S L+DMYSKCG + AR F M E++ V WN +I G
Sbjct: 159 GRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARSIFNKMTERDVVCWNSIISGLTI 218
Query: 181 NGCGDMAVEIFEDMIRQGEKPDTITFIAVLTACSHSGLVDIG 306
+ A + F+ M G P ++ +++ +CS + G
Sbjct: 219 HSLNKEAFDFFKQMRENGIMPTESSYASMINSCSRLSSIPHG 260
Score = 71.6 bits (174), Expect = 6e-11
Identities = 34/84 (40%), Positives = 52/84 (61%)
Frame = +1
Query: 28 KDGYTSDVYVGSALIDMYSKCGNVDEARQFFEGMNEKNTVSWNEMIHGYAQNGCGDMAVE 207
+ G+ SD +VG++LIDMY+KC +DEA + FE + VSWN +I G+ Q G AVE
Sbjct: 1 RKGFGSDQHVGNSLIDMYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVE 60
Query: 208 IFEDMIRQGEKPDTITFIAVLTAC 279
+ M G +P+ +T+ +L +C
Sbjct: 61 VLSLMQEAGFEPNEVTYSNLLASC 84
Score = 54.3 bits (129), Expect = 1e-05
Identities = 26/91 (28%), Positives = 45/91 (49%)
Frame = +1
Query: 34 GYTSDVYVGSALIDMYSKCGNVDEARQFFEGMNEKNTVSWNEMIHGYAQNGCGDMAVEIF 213
G+ + S L+ K +V AR F+ ++ + +WN ++ GY Q +E+F
Sbjct: 69 GFEPNEVTYSNLLASCIKARDVHSARAMFDKISRPSVTTWNTLLSGYCQEEQHQDTIELF 128
Query: 214 EDMIRQGEKPDTITFIAVLTACSHSGLVDIG 306
M Q +PD T +L++CS G++D G
Sbjct: 129 RRMQHQNVQPDRTTLAVILSSCSKLGILDFG 159