BLASTX nr result

ID: Coptis23_contig00042965 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00042965
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312645.1| multidrug resistance protein ABC transporter...   167   6e-40
ref|XP_002266601.1| PREDICTED: ABC transporter C family member 3...   166   1e-39
ref|XP_002515003.1| multidrug resistance-associated protein 2, 6...   166   2e-39
ref|XP_003532715.1| PREDICTED: ABC transporter C family member 3...   162   3e-38
ref|XP_003524162.1| PREDICTED: ABC transporter C family member 3...   159   2e-37

>ref|XP_002312645.1| multidrug resistance protein ABC transporter family [Populus
            trichocarpa] gi|222852465|gb|EEE90012.1| multidrug
            resistance protein ABC transporter family [Populus
            trichocarpa]
          Length = 1361

 Score =  167 bits (424), Expect = 6e-40
 Identities = 75/102 (73%), Positives = 88/102 (86%)
 Frame = -3

Query: 308  MSYIAWQIFVLFFVILAISVWYQAYYITTARELARMTGTKKSPILHHFSESIAGASTVRC 129
            MS +AWQ+F +F VIL IS+WYQAYYITTARELARM G +K+PILHHFSESI GA+T+RC
Sbjct: 935  MSQVAWQVFPIFLVILGISIWYQAYYITTARELARMVGIRKAPILHHFSESITGAATIRC 994

Query: 128  FKQEARFLAKTQNLIDDYSCLTFHNSATMEWLCVRINFLFNL 3
            F QE RFL ++ +LIDDYS + FHNS TMEWLC+RINFLFNL
Sbjct: 995  FNQEERFLMRSLSLIDDYSRIVFHNSGTMEWLCIRINFLFNL 1036


>ref|XP_002266601.1| PREDICTED: ABC transporter C family member 3-like [Vitis vinifera]
          Length = 1462

 Score =  166 bits (421), Expect = 1e-39
 Identities = 75/102 (73%), Positives = 89/102 (87%)
 Frame = -3

Query: 308  MSYIAWQIFVLFFVILAISVWYQAYYITTARELARMTGTKKSPILHHFSESIAGASTVRC 129
            MS +AWQ+F+LF  ILAIS+WYQAYYI TARELARM G +K+PILHHFSES+AGA+T+RC
Sbjct: 1030 MSQVAWQVFLLFVSILAISIWYQAYYIATARELARMVGVRKAPILHHFSESVAGAATIRC 1089

Query: 128  FKQEARFLAKTQNLIDDYSCLTFHNSATMEWLCVRINFLFNL 3
            F Q+ RFL +  +LIDDYS + FHN+ATMEWLCVRINFLFNL
Sbjct: 1090 FSQDDRFLRRNLSLIDDYSRVAFHNTATMEWLCVRINFLFNL 1131


>ref|XP_002515003.1| multidrug resistance-associated protein 2, 6 (mrp2, 6),
            abc-transoprter, putative [Ricinus communis]
            gi|223546054|gb|EEF47557.1| multidrug
            resistance-associated protein 2, 6 (mrp2, 6),
            abc-transoprter, putative [Ricinus communis]
          Length = 1464

 Score =  166 bits (419), Expect = 2e-39
 Identities = 75/102 (73%), Positives = 88/102 (86%)
 Frame = -3

Query: 308  MSYIAWQIFVLFFVILAISVWYQAYYITTARELARMTGTKKSPILHHFSESIAGASTVRC 129
            MS +AWQIF+LF VIL IS+WYQAYYITTARELARM G +K+PILHHFSESIAGA+T+ C
Sbjct: 1031 MSQVAWQIFILFLVILGISLWYQAYYITTARELARMVGIRKAPILHHFSESIAGAATIHC 1090

Query: 128  FKQEARFLAKTQNLIDDYSCLTFHNSATMEWLCVRINFLFNL 3
            F Q+ RFL +  +LIDDYS + FHN+ TMEWLC+RINFLFNL
Sbjct: 1091 FNQQDRFLMRNLSLIDDYSRIVFHNTGTMEWLCLRINFLFNL 1132


>ref|XP_003532715.1| PREDICTED: ABC transporter C family member 3-like [Glycine max]
          Length = 1454

 Score =  162 bits (409), Expect = 3e-38
 Identities = 74/102 (72%), Positives = 86/102 (84%)
 Frame = -3

Query: 308  MSYIAWQIFVLFFVILAISVWYQAYYITTARELARMTGTKKSPILHHFSESIAGASTVRC 129
            MS +AWQ+ +LFFV+ AIS+WYQAYYITTARELARM G +K+PILHHFSESIAGA+T+RC
Sbjct: 1020 MSQVAWQVILLFFVVFAISIWYQAYYITTARELARMVGIRKAPILHHFSESIAGAATIRC 1079

Query: 128  FKQEARFLAKTQNLIDDYSCLTFHNSATMEWLCVRINFLFNL 3
            F QE  F+ K + LIDDYS + FHN  TMEWL VRINFLFNL
Sbjct: 1080 FNQEKLFMTKIKALIDDYSRVAFHNFGTMEWLSVRINFLFNL 1121


>ref|XP_003524162.1| PREDICTED: ABC transporter C family member 3-like [Glycine max]
          Length = 1452

 Score =  159 bits (403), Expect = 2e-37
 Identities = 73/102 (71%), Positives = 84/102 (82%)
 Frame = -3

Query: 308  MSYIAWQIFVLFFVILAISVWYQAYYITTARELARMTGTKKSPILHHFSESIAGASTVRC 129
            MS +AWQ+ +LFF +L IS+WYQAYYITTARELARM G +K+PILHHFSESIAGA+T+RC
Sbjct: 1018 MSQVAWQVILLFFAVLPISIWYQAYYITTARELARMVGIRKAPILHHFSESIAGAATIRC 1077

Query: 128  FKQEARFLAKTQNLIDDYSCLTFHNSATMEWLCVRINFLFNL 3
            F QE  F  K + LIDDYS + FHN  TMEWL VRINFLFNL
Sbjct: 1078 FNQEKLFFTKVKALIDDYSRVAFHNFGTMEWLSVRINFLFNL 1119


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