BLASTX nr result

ID: Coptis23_contig00042950 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00042950
         (271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314990.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09
ref|XP_002519299.1| ATP binding protein, putative [Ricinus commu...    66   3e-09
ref|XP_002883057.1| hypothetical protein ARALYDRAFT_898075 [Arab...    59   3e-07
ref|NP_188362.2| phragmoplast orienting kinesin 1 [Arabidopsis t...    59   4e-07
dbj|BAB02740.1| kinesin-related centromere protein-like [Arabido...    59   4e-07

>ref|XP_002314990.1| predicted protein [Populus trichocarpa] gi|222864030|gb|EEF01161.1|
           predicted protein [Populus trichocarpa]
          Length = 1851

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 36/93 (38%), Positives = 57/93 (61%), Gaps = 4/93 (4%)
 Frame = +3

Query: 3   RDLKEARILNKRFLDVQASQIFRQNEFKQVCQEVEAETAKTIL----RXXXXXXXXXDKM 170
           +DL+EAR LN  + + QAS++++Q++ + VC+EVE ET +TIL              +++
Sbjct: 653 KDLEEARSLNYHYQEDQASKLYQQHQAELVCEEVETETTRTILHLQEEITALQLELDERL 712

Query: 171 GSTTGENSRLINDIEAREYEIKMFSEEWEKATL 269
              T EN+ L N + A+E EI+    EWE+ATL
Sbjct: 713 YCMTQENTGLRNTVAAKEAEIRALCGEWERATL 745


>ref|XP_002519299.1| ATP binding protein, putative [Ricinus communis]
            gi|223541614|gb|EEF43163.1| ATP binding protein, putative
            [Ricinus communis]
          Length = 2140

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 36/92 (39%), Positives = 56/92 (60%), Gaps = 4/92 (4%)
 Frame = +3

Query: 3    RDLKEARILNKRFLDVQASQIFRQNEFKQVCQEVEAETAKTILRXXXXXXXXXD----KM 170
            +DL++AR+LN ++ + QASQ+  Q++ + + ++VE ET +TIL               K+
Sbjct: 789  KDLEQARLLNCKYQEDQASQLSHQHQVELIREQVETETTRTILHLHEEVTSLQSELNGKL 848

Query: 171  GSTTGENSRLINDIEAREYEIKMFSEEWEKAT 266
               T EN +L N IEA+E EI+M   EWE+AT
Sbjct: 849  CCMTHENMKLRNSIEAKEEEIQMLCGEWERAT 880


>ref|XP_002883057.1| hypothetical protein ARALYDRAFT_898075 [Arabidopsis lyrata subsp.
            lyrata] gi|297328897|gb|EFH59316.1| hypothetical protein
            ARALYDRAFT_898075 [Arabidopsis lyrata subsp. lyrata]
          Length = 2057

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 4/93 (4%)
 Frame = +3

Query: 3    RDLKEARILNKRFLDVQASQIFRQNEFKQVCQEVEAETAKTILRXXXXXXXXXD----KM 170
            +DL+EAR LN ++     SQ+ +Q + + V ++VE ETA+TIL               ++
Sbjct: 825  KDLEEARTLNCQYEKEHMSQLSQQEDIEVVREQVETETARTILELQEEVIALQSDFQRRI 884

Query: 171  GSTTGENSRLINDIEAREYEIKMFSEEWEKATL 269
             + T EN  + N I ARE EI+  +++WEK TL
Sbjct: 885  CNLTEENQSMKNTITAREAEIRALNQDWEKGTL 917


>ref|NP_188362.2| phragmoplast orienting kinesin 1 [Arabidopsis thaliana]
            gi|89160907|gb|ABD62996.1| kinesin POK1 [Arabidopsis
            thaliana] gi|332642422|gb|AEE75943.1| phragmoplast
            orienting kinesin 1 [Arabidopsis thaliana]
          Length = 2066

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 34/93 (36%), Positives = 54/93 (58%), Gaps = 4/93 (4%)
 Frame = +3

Query: 3    RDLKEARILNKRFLDVQASQIFRQNEFKQVCQEVEAETAKTILRXXXXXXXXXD----KM 170
            +DL+EAR LN ++     SQ+ +Q + + V ++VE ETA+TIL               ++
Sbjct: 831  KDLEEARTLNCKYEKDHKSQLSQQEDIEVVREQVETETARTILELQEEVIALQSEFQRRI 890

Query: 171  GSTTGENSRLINDIEAREYEIKMFSEEWEKATL 269
             + T EN  + + I ARE EI+  +++WEKATL
Sbjct: 891  CNLTEENQSIKDTITARESEIRALNQDWEKATL 923


>dbj|BAB02740.1| kinesin-related centromere protein-like [Arabidopsis thaliana]
          Length = 2158

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 34/93 (36%), Positives = 54/93 (58%), Gaps = 4/93 (4%)
 Frame = +3

Query: 3    RDLKEARILNKRFLDVQASQIFRQNEFKQVCQEVEAETAKTILRXXXXXXXXXD----KM 170
            +DL+EAR LN ++     SQ+ +Q + + V ++VE ETA+TIL               ++
Sbjct: 894  KDLEEARTLNCKYEKDHKSQLSQQEDIEVVREQVETETARTILELQEEVIALQSEFQRRI 953

Query: 171  GSTTGENSRLINDIEAREYEIKMFSEEWEKATL 269
             + T EN  + + I ARE EI+  +++WEKATL
Sbjct: 954  CNLTEENQSIKDTITARESEIRALNQDWEKATL 986


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