BLASTX nr result

ID: Coptis23_contig00042945 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00042945
         (285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003551329.1| PREDICTED: putative B3 domain-containing pro...    71   8e-11
ref|XP_004146931.1| PREDICTED: putative B3 domain-containing pro...    69   5e-10
ref|XP_003548489.1| PREDICTED: B3 domain-containing transcriptio...    68   7e-10
ref|XP_003530814.1| PREDICTED: B3 domain-containing transcriptio...    68   7e-10
ref|XP_003622663.1| B3 domain-containing protein [Medicago trunc...    67   1e-09

>ref|XP_003551329.1| PREDICTED: putative B3 domain-containing protein Os03g0621600-like
           [Glycine max]
          Length = 344

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 29/61 (47%), Positives = 40/61 (65%)
 Frame = +3

Query: 102 HFFAFILPSCIQDGRLAIPKKFLRKFGKELSGTVVLKVPNTKEWCVELKEEGGQVWFQTG 281
           HFF  I    + +G+L IP KF++K+GK L  T+ LK PN  EW + LK+  G++WFQ G
Sbjct: 15  HFFKIITAHNVHEGKLMIPNKFVKKYGKRLQNTLFLKTPNGAEWKMILKKRDGKIWFQKG 74

Query: 282 W 284
           W
Sbjct: 75  W 75


>ref|XP_004146931.1| PREDICTED: putative B3 domain-containing protein Os03g0621600-like
           [Cucumis sativus]
          Length = 346

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 31/60 (51%), Positives = 41/60 (68%)
 Frame = +3

Query: 105 FFAFILPSCIQDGRLAIPKKFLRKFGKELSGTVVLKVPNTKEWCVELKEEGGQVWFQTGW 284
           FF  ILPS +++ +L +P KF+R FGKELS +VVL VPN   W V L++  GQ+WF   W
Sbjct: 32  FFKIILPSSVREEKLKMPSKFIRMFGKELSSSVVLIVPNGGVWEVGLEKFNGQIWFNHSW 91


>ref|XP_003548489.1| PREDICTED: B3 domain-containing transcription factor VRN1-like
           [Glycine max]
          Length = 363

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 28/61 (45%), Positives = 38/61 (62%)
 Frame = +3

Query: 102 HFFAFILPSCIQDGRLAIPKKFLRKFGKELSGTVVLKVPNTKEWCVELKEEGGQVWFQTG 281
           HFF  I    +QDG+L IP KF+ K+G+ L   + LK PN  EW   L++  G++WFQ G
Sbjct: 16  HFFKIITAQNLQDGKLMIPNKFVEKYGEGLPNALFLKTPNGTEWNFNLEKHDGKIWFQKG 75

Query: 282 W 284
           W
Sbjct: 76  W 76


>ref|XP_003530814.1| PREDICTED: B3 domain-containing transcription factor VRN1-like
           [Glycine max]
          Length = 477

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 28/61 (45%), Positives = 40/61 (65%)
 Frame = +3

Query: 102 HFFAFILPSCIQDGRLAIPKKFLRKFGKELSGTVVLKVPNTKEWCVELKEEGGQVWFQTG 281
           HF   + P  +  G+L +P +F+ K+GK LS T+ LK+PN  EW V L++  G+VWFQ G
Sbjct: 22  HFLRIMHPDNLLQGKLRLPAEFVNKYGKHLSNTMFLKLPNGAEWRVNLEKRDGRVWFQEG 81

Query: 282 W 284
           W
Sbjct: 82  W 82



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 23/44 (52%), Positives = 33/44 (75%)
 Frame = +3

Query: 153 IPKKFLRKFGKELSGTVVLKVPNTKEWCVELKEEGGQVWFQTGW 284
           +P+KF+RK+G  LS +++LK+PN  EW V L++  G VWFQ GW
Sbjct: 232 LPEKFVRKYGNHLSNSMLLKLPNGIEWKVNLEKRDGSVWFQEGW 275


>ref|XP_003622663.1| B3 domain-containing protein [Medicago truncatula]
           gi|355497678|gb|AES78881.1| B3 domain-containing protein
           [Medicago truncatula]
          Length = 315

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 26/61 (42%), Positives = 41/61 (67%)
 Frame = +3

Query: 102 HFFAFILPSCIQDGRLAIPKKFLRKFGKELSGTVVLKVPNTKEWCVELKEEGGQVWFQTG 281
           HFF  IL   +Q+G+L +P+KF+ K+G+ LS  + LK PN  +W + L +  G++WF+ G
Sbjct: 12  HFFKIILAQNLQEGKLMMPRKFVEKYGEGLSNAIYLKTPNGAKWKLNLLKINGKIWFEKG 71

Query: 282 W 284
           W
Sbjct: 72  W 72


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