BLASTX nr result

ID: Coptis23_contig00042932 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00042932
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003523888.1| PREDICTED: cytochrome P450 82C4-like [Glycin...    62   4e-08
ref|XP_002327096.1| cytochrome P450 [Populus trichocarpa] gi|222...    58   9e-07
ref|XP_002284031.1| PREDICTED: cytochrome P450 82C4 [Vitis vinif...    57   1e-06
ref|XP_002510297.1| cytochrome P450, putative [Ricinus communis]...    55   4e-06
ref|XP_003527707.1| PREDICTED: LOW QUALITY PROTEIN: cytochrome P...    55   6e-06

>ref|XP_003523888.1| PREDICTED: cytochrome P450 82C4-like [Glycine max]
          Length = 526

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 30/42 (71%), Positives = 33/42 (78%)
 Frame = +2

Query: 2   FKLDTPLGETVDMTESPGLTIPKATDLNVLVTPRLPFKLY*C 127
           F+  TP  + VDMTESPGLTIPKAT L VL+TPRLP KLY C
Sbjct: 485 FEFATPSDQPVDMTESPGLTIPKATPLEVLLTPRLPAKLYAC 526


>ref|XP_002327096.1| cytochrome P450 [Populus trichocarpa] gi|222835411|gb|EEE73846.1|
           cytochrome P450 [Populus trichocarpa]
          Length = 392

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 27/40 (67%), Positives = 33/40 (82%)
 Frame = +2

Query: 2   FKLDTPLGETVDMTESPGLTIPKATDLNVLVTPRLPFKLY 121
           F+L TP+ + VD+TES GLTIPKAT L V++TPRLP KLY
Sbjct: 351 FELATPMDQPVDLTESSGLTIPKATPLEVILTPRLPPKLY 390


>ref|XP_002284031.1| PREDICTED: cytochrome P450 82C4 [Vitis vinifera]
           gi|302142392|emb|CBI19595.3| unnamed protein product
           [Vitis vinifera]
          Length = 527

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 28/40 (70%), Positives = 32/40 (80%)
 Frame = +2

Query: 2   FKLDTPLGETVDMTESPGLTIPKATDLNVLVTPRLPFKLY 121
           F+L TP+ + VDMTES GLTIPKAT L VL+TPRL  KLY
Sbjct: 486 FELSTPVDQPVDMTESSGLTIPKATPLEVLLTPRLNSKLY 525


>ref|XP_002510297.1| cytochrome P450, putative [Ricinus communis]
           gi|223550998|gb|EEF52484.1| cytochrome P450, putative
           [Ricinus communis]
          Length = 526

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 25/42 (59%), Positives = 31/42 (73%)
 Frame = +2

Query: 2   FKLDTPLGETVDMTESPGLTIPKATDLNVLVTPRLPFKLY*C 127
           F L TP+ + +DM+E PG  +PKAT L VLV+PRLP KLY C
Sbjct: 482 FDLATPMDQPIDMSEMPGTHVPKATPLEVLVSPRLPAKLYRC 523


>ref|XP_003527707.1| PREDICTED: LOW QUALITY PROTEIN: cytochrome P450 82C4-like [Glycine
           max]
          Length = 444

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 27/40 (67%), Positives = 31/40 (77%)
 Frame = +2

Query: 2   FKLDTPLGETVDMTESPGLTIPKATDLNVLVTPRLPFKLY 121
           F+  TP  + VDMTESPGLT+PKAT L VL+T RLP KLY
Sbjct: 403 FEFATPSDQPVDMTESPGLTMPKATLLEVLLTSRLPAKLY 442


Top