BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00042929
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABG37658.1| integrase [Populus trichocarpa]                        178   4e-43
gb|ABG37668.1| gag protein [Populus trichocarpa]                      172   2e-41
gb|ABG37657.1| integrase [Populus trichocarpa]                        172   2e-41
emb|CAN69829.1| hypothetical protein VITISV_039365 [Vitis vinifera]   171   6e-41
emb|CAN82478.1| hypothetical protein VITISV_043187 [Vitis vinifera]   170   1e-40

>gb|ABG37658.1| integrase [Populus trichocarpa]
          Length = 1139

 Score =  178 bits (452), Expect = 4e-43
 Identities = 82/101 (81%), Positives = 89/101 (88%)
 Frame = +1

Query: 1   FLDDYSVYFQIVIDPADQEKTTFTCPFGTFAYKRMPFSLCNAPGTFQRCMLHIFSDMVER 180
           FLD YS Y QI I   DQEKTTFTCPFGTFAY+RMPF LCNAP TFQRCML IFSDMVER
Sbjct: 433 FLDGYSGYNQIEIALEDQEKTTFTCPFGTFAYRRMPFGLCNAPATFQRCMLSIFSDMVER 492

Query: 181 FMEVFMDDFSIYGDSFDSCLSNLEKVFTRCEEKNLVLNWEK 303
           F+E+FMDDFS++GDSFD CL+NLEKV +RCEEKNLVLNWEK
Sbjct: 493 FLEIFMDDFSVFGDSFDDCLTNLEKVLSRCEEKNLVLNWEK 533


>gb|ABG37668.1| gag protein [Populus trichocarpa]
          Length = 1886

 Score =  172 bits (437), Expect = 2e-41
 Identities = 78/100 (78%), Positives = 87/100 (87%)
 Frame = +1

Query: 4    LDDYSVYFQIVIDPADQEKTTFTCPFGTFAYKRMPFSLCNAPGTFQRCMLHIFSDMVERF 183
            +D YS Y QI I   DQEKTTFTCPFGTFAY+RMPF LCNAP TFQRCML IFSDMVERF
Sbjct: 1179 VDGYSGYNQIEIALEDQEKTTFTCPFGTFAYRRMPFGLCNAPATFQRCMLSIFSDMVERF 1238

Query: 184  MEVFMDDFSIYGDSFDSCLSNLEKVFTRCEEKNLVLNWEK 303
            +E+FMDDFS++GDSFD CL+NLEKV  RCEEKNL+LNW+K
Sbjct: 1239 LEIFMDDFSVFGDSFDDCLTNLEKVLNRCEEKNLILNWKK 1278



 Score =  171 bits (433), Expect = 6e-41
 Identities = 77/101 (76%), Positives = 87/101 (86%)
 Frame = +1

Query: 1    FLDDYSVYFQIVIDPADQEKTTFTCPFGTFAYKRMPFSLCNAPGTFQRCMLHIFSDMVER 180
            + + YS Y QI I   DQEKTTFTCPFGTFAY+RMPF LCNAP TFQRCML IFSDMVER
Sbjct: 1414 YANGYSGYNQIEIALEDQEKTTFTCPFGTFAYRRMPFGLCNAPATFQRCMLSIFSDMVER 1473

Query: 181  FMEVFMDDFSIYGDSFDSCLSNLEKVFTRCEEKNLVLNWEK 303
            F+E+FMDDFS++GDSFD CL+NLEKV  RCEEKNL+LNW+K
Sbjct: 1474 FLEIFMDDFSVFGDSFDDCLTNLEKVLNRCEEKNLILNWKK 1514


>gb|ABG37657.1| integrase [Populus trichocarpa]
          Length = 1738

 Score =  172 bits (437), Expect = 2e-41
 Identities = 78/100 (78%), Positives = 87/100 (87%)
 Frame = +1

Query: 4    LDDYSVYFQIVIDPADQEKTTFTCPFGTFAYKRMPFSLCNAPGTFQRCMLHIFSDMVERF 183
            +D YS Y QI I   DQEKTTFTCPFGTFAY+RMPF LCNAP TFQRCML IFSDMVERF
Sbjct: 1031 VDGYSGYNQIEIALEDQEKTTFTCPFGTFAYRRMPFGLCNAPATFQRCMLSIFSDMVERF 1090

Query: 184  MEVFMDDFSIYGDSFDSCLSNLEKVFTRCEEKNLVLNWEK 303
            +E+FMDDFS++GDSFD CL+NLEKV  RCEEKNL+LNW+K
Sbjct: 1091 LEIFMDDFSVFGDSFDDCLTNLEKVLNRCEEKNLILNWKK 1130



 Score =  171 bits (433), Expect = 6e-41
 Identities = 77/101 (76%), Positives = 87/101 (86%)
 Frame = +1

Query: 1    FLDDYSVYFQIVIDPADQEKTTFTCPFGTFAYKRMPFSLCNAPGTFQRCMLHIFSDMVER 180
            + + YS Y QI I   DQEKTTFTCPFGTFAY+RMPF LCNAP TFQRCML IFSDMVER
Sbjct: 1266 YANGYSGYNQIEIALEDQEKTTFTCPFGTFAYRRMPFGLCNAPATFQRCMLSIFSDMVER 1325

Query: 181  FMEVFMDDFSIYGDSFDSCLSNLEKVFTRCEEKNLVLNWEK 303
            F+E+FMDDFS++GDSFD CL+NLEKV  RCEEKNL+LNW+K
Sbjct: 1326 FLEIFMDDFSVFGDSFDDCLTNLEKVLNRCEEKNLILNWKK 1366


>emb|CAN69829.1| hypothetical protein VITISV_039365 [Vitis vinifera]
          Length = 1755

 Score =  171 bits (433), Expect = 6e-41
 Identities = 79/101 (78%), Positives = 86/101 (85%)
 Frame = +1

Query: 1    FLDDYSVYFQIVIDPADQEKTTFTCPFGTFAYKRMPFSLCNAPGTFQRCMLHIFSDMVER 180
            FLD YS YFQI ID ADQEKTTFTCPFGT+AY+RMPF LCNAP TFQRCML IFSDMVER
Sbjct: 1036 FLDGYSGYFQIEIDVADQEKTTFTCPFGTYAYRRMPFGLCNAPATFQRCMLSIFSDMVER 1095

Query: 181  FMEVFMDDFSIYGDSFDSCLSNLEKVFTRCEEKNLVLNWEK 303
             MEVFMDD ++YGD+F+ CL NLE V  RC EK+LVLNWEK
Sbjct: 1096 IMEVFMDDITVYGDTFEECLVNLEAVLHRCIEKDLVLNWEK 1136


>emb|CAN82478.1| hypothetical protein VITISV_043187 [Vitis vinifera]
          Length = 1599

 Score =  170 bits (431), Expect = 1e-40
 Identities = 78/101 (77%), Positives = 86/101 (85%)
 Frame = +1

Query: 1    FLDDYSVYFQIVIDPADQEKTTFTCPFGTFAYKRMPFSLCNAPGTFQRCMLHIFSDMVER 180
            FLDDYS YFQI ID  DQEKTTFTCPFGT+AY+R+PFSLCNAP TFQRCML IFSDMVER
Sbjct: 738  FLDDYSGYFQIEIDVEDQEKTTFTCPFGTYAYRRLPFSLCNAPATFQRCMLSIFSDMVER 797

Query: 181  FMEVFMDDFSIYGDSFDSCLSNLEKVFTRCEEKNLVLNWEK 303
             MEVFMDD +IYG +F+ C+ NLE V  RC EK+LVLNWEK
Sbjct: 798  IMEVFMDDITIYGSTFEECIVNLEAVLNRCIEKDLVLNWEK 838