BLASTX nr result

ID: Coptis23_contig00042910 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00042910
         (283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004147438.1| PREDICTED: uncharacterized protein LOC101217...    88   8e-16
emb|CAN78668.1| hypothetical protein VITISV_031288 [Vitis vinifera]    87   1e-15
ref|XP_002305043.1| predicted protein [Populus trichocarpa] gi|2...    79   4e-13
ref|NP_001042565.1| Os01g0243600 [Oryza sativa Japonica Group] g...    73   2e-11
ref|XP_002521341.1| conserved hypothetical protein [Ricinus comm...    67   1e-09

>ref|XP_004147438.1| PREDICTED: uncharacterized protein LOC101217056 [Cucumis sativus]
           gi|449527135|ref|XP_004170568.1| PREDICTED:
           uncharacterized LOC101217056 [Cucumis sativus]
          Length = 231

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 49/89 (55%), Positives = 61/89 (68%), Gaps = 4/89 (4%)
 Frame = +3

Query: 27  NGC----GSFYSKIVGVKGPKSDKEMERLDGWIKYFLSNKDDDGIVKEPLRLVHLLIGKA 194
           NGC      FYSKIVG+KGPK  KE+ERL+GWI++F SN  D+    EPLRL +LL+GKA
Sbjct: 142 NGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFF-SNGGDEEDRLEPLRLAYLLLGKA 200

Query: 195 VVACTSCNEDEDNNGGFEDIEFPSTVEEF 281
           V A        D++G  E +EFPSTVE+F
Sbjct: 201 VFA------SNDDDGCLEGLEFPSTVEDF 223


>emb|CAN78668.1| hypothetical protein VITISV_031288 [Vitis vinifera]
          Length = 224

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 42/80 (52%), Positives = 56/80 (70%)
 Frame = +3

Query: 42  FYSKIVGVKGPKSDKEMERLDGWIKYFLSNKDDDGIVKEPLRLVHLLIGKAVVACTSCNE 221
           FYS+IVGVKGPK  KE+ERL+GW+K+F +  +++   +EPLRL H+L+GKAV        
Sbjct: 142 FYSRIVGVKGPKCGKEVERLEGWVKHFYNGGEEER--REPLRLAHMLLGKAVF---DSEN 196

Query: 222 DEDNNGGFEDIEFPSTVEEF 281
                GGF  +EFPST+EEF
Sbjct: 197 SGGGGGGFRGLEFPSTIEEF 216


>ref|XP_002305043.1| predicted protein [Populus trichocarpa] gi|222848007|gb|EEE85554.1|
           predicted protein [Populus trichocarpa]
          Length = 217

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 44/85 (51%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
 Frame = +3

Query: 30  GC-GSFYSKIVGVKGPKSDKEMERLDGWIKYFLSNKDDDGIVKEPLRLVHLLIGKAVVAC 206
           GC G F+ KIVGVKGPK +KE+ERL+GWI+YFL +  ++   +EPL L  LL+GKA    
Sbjct: 135 GCEGGFFEKIVGVKGPKCEKEVERLEGWIRYFLGDGGEER--REPLMLAFLLLGKAAY-- 190

Query: 207 TSCNEDEDNNGGFEDIEFPSTVEEF 281
               E E  +GG   ++FPST+EEF
Sbjct: 191 ----ELEGADGG--GLDFPSTIEEF 209


>ref|NP_001042565.1| Os01g0243600 [Oryza sativa Japonica Group]
           gi|20160495|dbj|BAB89447.1| hypothetical protein [Oryza
           sativa Japonica Group] gi|21104532|dbj|BAB93127.1|
           hypothetical protein [Oryza sativa Japonica Group]
           gi|113532096|dbj|BAF04479.1| Os01g0243600 [Oryza sativa
           Japonica Group] gi|125569707|gb|EAZ11222.1| hypothetical
           protein OsJ_01076 [Oryza sativa Japonica Group]
          Length = 233

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 35/85 (41%), Positives = 53/85 (62%)
 Frame = +3

Query: 27  NGCGSFYSKIVGVKGPKSDKEMERLDGWIKYFLSNKDDDGIVKEPLRLVHLLIGKAVVAC 206
           +G   F +K+VGV GPK DKE  R+DGW++++ S     G  +EP RL HLL+ KA  + 
Sbjct: 141 SGGEGFLAKVVGVVGPKCDKEKRRVDGWVEHYFSG----GECREPARLAHLLLAKAAASS 196

Query: 207 TSCNEDEDNNGGFEDIEFPSTVEEF 281
           +S + + + + G     FP+TV+EF
Sbjct: 197 SSSSWEGEGHRGASPFAFPATVKEF 221


>ref|XP_002521341.1| conserved hypothetical protein [Ricinus communis]
           gi|223539419|gb|EEF41009.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 221

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 40/97 (41%), Positives = 53/97 (54%), Gaps = 4/97 (4%)
 Frame = +3

Query: 3   KNETMNVNNGC---GSFYSKIVGVKGPKSDKEMERLDGWIKYFLSNKDDDGIVK-EPLRL 170
           K + +  N  C   G FY KIVGVKGPK   EM+RL+ WI YFL N +     + EPLRL
Sbjct: 129 KGQQVEGNECCECEGGFYEKIVGVKGPKCKIEMDRLERWIDYFLHNSECGAEGRMEPLRL 188

Query: 171 VHLLIGKAVVACTSCNEDEDNNGGFEDIEFPSTVEEF 281
             LL+G+A     +             ++FPST+E+F
Sbjct: 189 AFLLLGRATFELDT------------GLDFPSTIEDF 213


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