BLASTX nr result

ID: Coptis23_contig00042828 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00042828
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30685.3| unnamed protein product [Vitis vinifera]               72   6e-11
ref|XP_002266486.1| PREDICTED: protein SCAR3-like [Vitis vinifera]     72   6e-11
ref|XP_004164274.1| PREDICTED: uncharacterized protein LOC101224...    68   7e-10
ref|XP_004148624.1| PREDICTED: uncharacterized protein LOC101215...    68   7e-10
ref|XP_002522581.1| hypothetical protein RCOM_1015180 [Ricinus c...    68   7e-10

>emb|CBI30685.3| unnamed protein product [Vitis vinifera]
          Length = 841

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 35/56 (62%), Positives = 40/56 (71%)
 Frame = +2

Query: 2   QIRTKSLSLKRTVSARPTAIPGPFANIKVTAILQKANEIRQAFVGSDEEDSDNWSD 169
           QIRTKS SL+RT + R T +P P  N+ VTAIL+KAN IRQA    D ED DNWSD
Sbjct: 785 QIRTKSFSLRRTATPRLTVMPTPATNVSVTAILEKANAIRQAVGSDDGEDDDNWSD 840


>ref|XP_002266486.1| PREDICTED: protein SCAR3-like [Vitis vinifera]
          Length = 1135

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 35/56 (62%), Positives = 40/56 (71%)
 Frame = +2

Query: 2    QIRTKSLSLKRTVSARPTAIPGPFANIKVTAILQKANEIRQAFVGSDEEDSDNWSD 169
            QIRTKS SL+RT + R T +P P  N+ VTAIL+KAN IRQA    D ED DNWSD
Sbjct: 1079 QIRTKSFSLRRTATPRLTVMPTPATNVSVTAILEKANAIRQAVGSDDGEDDDNWSD 1134


>ref|XP_004164274.1| PREDICTED: uncharacterized protein LOC101224024 [Cucumis sativus]
          Length = 1555

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 37/58 (63%), Positives = 43/58 (74%), Gaps = 2/58 (3%)
 Frame = +2

Query: 2    QIRTKSLSLKRTVSARPTAIPGPFANIKVTAILQKANEIRQAFVGSDEED--SDNWSD 169
            QIRTKS SLK     RP+ I GP  N++V AIL+KAN IRQAF GSD+ED  SD+WSD
Sbjct: 1497 QIRTKSFSLKPAAVTRPS-IQGPKTNLRVAAILEKANAIRQAFAGSDDEDDNSDSWSD 1553


>ref|XP_004148624.1| PREDICTED: uncharacterized protein LOC101215386 [Cucumis sativus]
          Length = 1575

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 37/58 (63%), Positives = 43/58 (74%), Gaps = 2/58 (3%)
 Frame = +2

Query: 2    QIRTKSLSLKRTVSARPTAIPGPFANIKVTAILQKANEIRQAFVGSDEED--SDNWSD 169
            QIRTKS SLK     RP+ I GP  N++V AIL+KAN IRQAF GSD+ED  SD+WSD
Sbjct: 1517 QIRTKSFSLKPAAVTRPS-IQGPKTNLRVAAILEKANAIRQAFAGSDDEDDNSDSWSD 1573


>ref|XP_002522581.1| hypothetical protein RCOM_1015180 [Ricinus communis]
            gi|223538272|gb|EEF39881.1| hypothetical protein
            RCOM_1015180 [Ricinus communis]
          Length = 1111

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 35/56 (62%), Positives = 40/56 (71%)
 Frame = +2

Query: 2    QIRTKSLSLKRTVSARPTAIPGPFANIKVTAILQKANEIRQAFVGSDEEDSDNWSD 169
            QIR KS +L+RTV+A+PT   GP AN KVTAIL+KA  IRQA    D ED D WSD
Sbjct: 1055 QIRRKSFTLRRTVAAKPTFAAGPAANDKVTAILEKAIAIRQAVGSDDGEDDDTWSD 1110


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