BLASTX nr result

ID: Coptis23_contig00042706 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00042706
         (503 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525575.1| serine-threonine protein kinase, plant-type,...   143   1e-32
ref|XP_002272787.2| PREDICTED: inactive protein kinase SELMODRAF...   139   2e-31
emb|CAN78896.1| hypothetical protein VITISV_025420 [Vitis vinifera]   139   2e-31
ref|XP_002299169.1| predicted protein [Populus trichocarpa] gi|2...   134   6e-30
ref|XP_003523916.1| PREDICTED: uncharacterized protein LOC100794...   122   3e-26

>ref|XP_002525575.1| serine-threonine protein kinase, plant-type, putative [Ricinus
           communis] gi|223535154|gb|EEF36834.1| serine-threonine
           protein kinase, plant-type, putative [Ricinus communis]
          Length = 726

 Score =  143 bits (361), Expect = 1e-32
 Identities = 69/90 (76%), Positives = 77/90 (85%)
 Frame = +1

Query: 232 GWPTEEAFENSICSVCQNERPRIGWQRDFTYAELQAATDGFSEETFLSEGGFGSVYRGRL 411
           G PT+E F NS+CS+C+N RPRIGW+RDFTYAEL AAT+GFS + FLSEGGFGSVYRG L
Sbjct: 336 GGPTDEMFNNSVCSICKNRRPRIGWKRDFTYAELHAATEGFSPKNFLSEGGFGSVYRGEL 395

Query: 412 KDGLNIAVKQHKDASLQGEKEFKSEVDVLS 501
             GL IAVKQHK AS QGEKEFKSEV+VLS
Sbjct: 396 -GGLKIAVKQHKSASFQGEKEFKSEVNVLS 424


>ref|XP_002272787.2| PREDICTED: inactive protein kinase SELMODRAFT_444075-like [Vitis
           vinifera]
          Length = 714

 Score =  139 bits (350), Expect = 2e-31
 Identities = 71/113 (62%), Positives = 83/113 (73%)
 Frame = +1

Query: 163 TRTQDQEWMLSYSNEDLVAPGPPGWPTEEAFENSICSVCQNERPRIGWQRDFTYAELQAA 342
           T   +QE     S  D ++   P    EE F NS C+VC+N RP+IGW++DFTYAELQAA
Sbjct: 272 TTNTEQETAEEQSASDQMSEFQP----EEIFRNSSCTVCKNRRPKIGWKKDFTYAELQAA 327

Query: 343 TDGFSEETFLSEGGFGSVYRGRLKDGLNIAVKQHKDASLQGEKEFKSEVDVLS 501
           T+GF+ E FLSEGGFG VY G+LK+GL IAVKQHK AS QGEKEFKSEV VLS
Sbjct: 328 TEGFASENFLSEGGFGPVYGGQLKNGLKIAVKQHKHASFQGEKEFKSEVTVLS 380


>emb|CAN78896.1| hypothetical protein VITISV_025420 [Vitis vinifera]
          Length = 648

 Score =  139 bits (350), Expect = 2e-31
 Identities = 71/113 (62%), Positives = 83/113 (73%)
 Frame = +1

Query: 163 TRTQDQEWMLSYSNEDLVAPGPPGWPTEEAFENSICSVCQNERPRIGWQRDFTYAELQAA 342
           T   +QE     S  D ++   P    EE F NS C+VC+N RP+IGW++DFTYAELQAA
Sbjct: 206 TTNTEQETAEEQSASDQMSEFQP----EEIFRNSSCTVCKNRRPKIGWKKDFTYAELQAA 261

Query: 343 TDGFSEETFLSEGGFGSVYRGRLKDGLNIAVKQHKDASLQGEKEFKSEVDVLS 501
           T+GF+ E FLSEGGFG VY G+LK+GL IAVKQHK AS QGEKEFKSEV VLS
Sbjct: 262 TEGFASENFLSEGGFGPVYGGQLKNGLKIAVKQHKHASFQGEKEFKSEVTVLS 314


>ref|XP_002299169.1| predicted protein [Populus trichocarpa] gi|222846427|gb|EEE83974.1|
           predicted protein [Populus trichocarpa]
          Length = 308

 Score =  134 bits (338), Expect = 6e-30
 Identities = 66/90 (73%), Positives = 75/90 (83%)
 Frame = +1

Query: 232 GWPTEEAFENSICSVCQNERPRIGWQRDFTYAELQAATDGFSEETFLSEGGFGSVYRGRL 411
           G P +E F NSICSVC+N RP+IGW+RDF+YAE+ AAT+G S+  FLSEGGFGSVYRG L
Sbjct: 3   GSPKDEVFRNSICSVCKNRRPKIGWKRDFSYAEIHAATEGSSQTKFLSEGGFGSVYRGDL 62

Query: 412 KDGLNIAVKQHKDASLQGEKEFKSEVDVLS 501
            DGL IAVKQH  AS QGEKEFKSEV+VLS
Sbjct: 63  -DGLAIAVKQHNGASFQGEKEFKSEVEVLS 91


>ref|XP_003523916.1| PREDICTED: uncharacterized protein LOC100794450 [Glycine max]
          Length = 693

 Score =  122 bits (306), Expect = 3e-26
 Identities = 61/86 (70%), Positives = 70/86 (81%)
 Frame = +1

Query: 244 EEAFENSICSVCQNERPRIGWQRDFTYAELQAATDGFSEETFLSEGGFGSVYRGRLKDGL 423
           EE F N +CSVC+N RP IG +RDF+YAEL  AT GFS + FLSEGGFGSVY+G L +G+
Sbjct: 278 EEEFTNPLCSVCKNRRPNIGLKRDFSYAELHTATQGFSPKNFLSEGGFGSVYKG-LLNGM 336

Query: 424 NIAVKQHKDASLQGEKEFKSEVDVLS 501
            IAVKQHK AS QGEKEFKSEV+VLS
Sbjct: 337 KIAVKQHKYASFQGEKEFKSEVNVLS 362


Top