BLASTX nr result

ID: Coptis23_contig00042649 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00042649
         (385 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279613.1| PREDICTED: formin-like protein 6-like [Vitis...   148   5e-34
emb|CBI33699.3| unnamed protein product [Vitis vinifera]              148   5e-34
ref|XP_002525264.1| conserved hypothetical protein [Ricinus comm...   133   1e-29
ref|XP_002303397.1| predicted protein [Populus trichocarpa] gi|2...   133   1e-29
ref|XP_004147079.1| PREDICTED: formin-like protein 6-like [Cucum...   128   6e-28

>ref|XP_002279613.1| PREDICTED: formin-like protein 6-like [Vitis vinifera]
          Length = 886

 Score =  148 bits (373), Expect = 5e-34
 Identities = 79/127 (62%), Positives = 94/127 (74%)
 Frame = -3

Query: 383 STTNLSTPLPLATQPSNKTKKVAIAISVGIVTLGMVSALAFFLYRHRASHPAESQKLVGN 204
           +TTN + P+P ATQP+  TKKVAIAISVGIVTLGM+SALAFFLYRHR  HP ESQKLVG 
Sbjct: 83  ATTNGTAPIPTATQPTKPTKKVAIAISVGIVTLGMLSALAFFLYRHRVKHPGESQKLVGG 142

Query: 203 GGGEANSQRLRQESGQTTSELLYLGTMEPASRRSGSEGNEQVSGSPSPYHKLTSLRSSEL 24
           G     SQ  ++ES    S  LY+GT+EP SRRSG+E N     + SPYHKL S++ S+ 
Sbjct: 143 G-----SQSFQEESRVPPSSFLYIGTVEP-SRRSGNEANGANGTNGSPYHKLNSIKRSDR 196

Query: 23  HRPSPEL 3
           +RPSPEL
Sbjct: 197 YRPSPEL 203


>emb|CBI33699.3| unnamed protein product [Vitis vinifera]
          Length = 852

 Score =  148 bits (373), Expect = 5e-34
 Identities = 79/127 (62%), Positives = 94/127 (74%)
 Frame = -3

Query: 383 STTNLSTPLPLATQPSNKTKKVAIAISVGIVTLGMVSALAFFLYRHRASHPAESQKLVGN 204
           +TTN + P+P ATQP+  TKKVAIAISVGIVTLGM+SALAFFLYRHR  HP ESQKLVG 
Sbjct: 83  ATTNGTAPIPTATQPTKPTKKVAIAISVGIVTLGMLSALAFFLYRHRVKHPGESQKLVGG 142

Query: 203 GGGEANSQRLRQESGQTTSELLYLGTMEPASRRSGSEGNEQVSGSPSPYHKLTSLRSSEL 24
           G     SQ  ++ES    S  LY+GT+EP SRRSG+E N     + SPYHKL S++ S+ 
Sbjct: 143 G-----SQSFQEESRVPPSSFLYIGTVEP-SRRSGNEANGANGTNGSPYHKLNSIKRSDR 196

Query: 23  HRPSPEL 3
           +RPSPEL
Sbjct: 197 YRPSPEL 203


>ref|XP_002525264.1| conserved hypothetical protein [Ricinus communis]
           gi|223535422|gb|EEF37092.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 903

 Score =  133 bits (335), Expect = 1e-29
 Identities = 73/130 (56%), Positives = 88/130 (67%), Gaps = 3/130 (2%)
 Frame = -3

Query: 383 STTNLSTPLPLATQPSNKTKKVAIAISVGIVTLGMVSALAFFLYRHRASHPAESQKLVGN 204
           + TN S P+P ATQP+   KKVAIAISVGIVTLGM+S LAFFLYRHR  HP E+QKLVG 
Sbjct: 101 AATNGSIPIPTATQPAKPAKKVAIAISVGIVTLGMLSGLAFFLYRHRVKHPIETQKLVGG 160

Query: 203 GGGEANSQRLRQESGQTTSELLYLGTMEPASRRSGSEGNEQVSGSP---SPYHKLTSLRS 33
            G   NSQR   ES   +S +LY+GT+ P  R SG   N   + S    SPY KL S++ 
Sbjct: 161 TGINNNSQRFNDESMVPSSSVLYMGTVHP-GRTSGEVANVTTNESAPNVSPYRKLNSVKR 219

Query: 32  SELHRPSPEL 3
           S+ +RPSP+L
Sbjct: 220 SDRYRPSPDL 229


>ref|XP_002303397.1| predicted protein [Populus trichocarpa] gi|222840829|gb|EEE78376.1|
           predicted protein [Populus trichocarpa]
          Length = 578

 Score =  133 bits (335), Expect = 1e-29
 Identities = 75/131 (57%), Positives = 90/131 (68%), Gaps = 4/131 (3%)
 Frame = -3

Query: 383 STTNLSTPLPLATQPSNKTKKVAIAISVGIVTLGMVSALAFFLYRHRASHPAESQKLVGN 204
           S  N + P+P ATQP+   KKVAIAISVGIVTLGM+SALAFFLYRHRA HP ESQKLVG 
Sbjct: 90  SAVNGTIPIPTATQPAKPAKKVAIAISVGIVTLGMLSALAFFLYRHRAKHPRESQKLVG- 148

Query: 203 GGGEANSQRLRQESGQTTSELLYLGTMEPASRRSGSEGNEQVS----GSPSPYHKLTSLR 36
                NSQR   ES    S  LY+GT+EP SR S +E N   +     + SPYH+L S++
Sbjct: 149 ----GNSQRFADESRVPPSSFLYIGTVEP-SRASATEVNGTTTTTNGANTSPYHRLNSIK 203

Query: 35  SSELHRPSPEL 3
            S+ +RPSP+L
Sbjct: 204 RSDNYRPSPDL 214


>ref|XP_004147079.1| PREDICTED: formin-like protein 6-like [Cucumis sativus]
           gi|449489727|ref|XP_004158398.1| PREDICTED: formin-like
           protein 6-like [Cucumis sativus]
          Length = 888

 Score =  128 bits (321), Expect = 6e-28
 Identities = 73/128 (57%), Positives = 89/128 (69%), Gaps = 1/128 (0%)
 Frame = -3

Query: 383 STTNLSTPLPLAT-QPSNKTKKVAIAISVGIVTLGMVSALAFFLYRHRASHPAESQKLVG 207
           S++N + P+P AT QPS  TK VAIAISVGIVTLGM+SALAFFLYRHRA HP ESQKLV 
Sbjct: 90  SSSNGTMPIPAATAQPSKPTKTVAIAISVGIVTLGMLSALAFFLYRHRAKHPGESQKLV- 148

Query: 206 NGGGEANSQRLRQESGQTTSELLYLGTMEPASRRSGSEGNEQVSGSPSPYHKLTSLRSSE 27
             GG  N +R  ++S    S   Y+GT+EP S+ S  E N     + SPY KL S++ S+
Sbjct: 149 --GGSNNPERFVEDSRAPPSSFFYIGTVEP-SQSSVVEQNGANGANSSPYRKLNSIKRSD 205

Query: 26  LHRPSPEL 3
            +RPSPEL
Sbjct: 206 RYRPSPEL 213


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