BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00042645
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004155603.1| PREDICTED: tRNA wybutosine-synthesizing prot...   114   1e-23
ref|XP_004134760.1| PREDICTED: LOW QUALITY PROTEIN: tRNA wybutos...   114   1e-23
ref|XP_002304908.1| predicted protein [Populus trichocarpa] gi|2...   111   5e-23
ref|XP_003529632.1| PREDICTED: tRNA wybutosine-synthesizing prot...   109   3e-22
ref|XP_003610434.1| tRNA wybutosine-synthesizing protein 2/3/4 [...   109   3e-22

>ref|XP_004155603.1| PREDICTED: tRNA wybutosine-synthesizing protein 2/3/4-like [Cucumis
           sativus]
          Length = 1035

 Score =  114 bits (284), Expect = 1e-23
 Identities = 56/93 (60%), Positives = 67/93 (72%), Gaps = 2/93 (2%)
 Frame = +3

Query: 15  MEFEKRKAATLTSISSTELDKSPKGTIDTPIIPLLKTINNHPSYFTTSSCSGRISILLQP 194
           MEFEKRKAAT+ S+ STE DKSPKG++DTPIIPL+ T+N+HPSYFTTSSCSGRISIL QP
Sbjct: 1   MEFEKRKAATMASLGSTETDKSPKGSLDTPIIPLINTLNSHPSYFTTSSCSGRISILAQP 60

Query: 195 L--PQXXXXXXXXXXXXXXWLFITHELAKANIV 287
           +                  WLF++HE A+ N V
Sbjct: 61  ISTTSAAAPKPKKKALGGSWLFVSHEFAEPNSV 93


>ref|XP_004134760.1| PREDICTED: LOW QUALITY PROTEIN: tRNA wybutosine-synthesizing
           protein 2/3/4-like [Cucumis sativus]
          Length = 1034

 Score =  114 bits (284), Expect = 1e-23
 Identities = 56/93 (60%), Positives = 67/93 (72%), Gaps = 2/93 (2%)
 Frame = +3

Query: 15  MEFEKRKAATLTSISSTELDKSPKGTIDTPIIPLLKTINNHPSYFTTSSCSGRISILLQP 194
           MEFEKRKAAT+ S+ STE DKSPKG++DTPIIPL+ T+N+HPSYFTTSSCSGRISIL QP
Sbjct: 1   MEFEKRKAATMASLGSTETDKSPKGSLDTPIIPLINTLNSHPSYFTTSSCSGRISILAQP 60

Query: 195 L--PQXXXXXXXXXXXXXXWLFITHELAKANIV 287
           +                  WLF++HE A+ N V
Sbjct: 61  ISTTSAAAPKPKKKALGGSWLFVSHEFAEPNSV 93


>ref|XP_002304908.1| predicted protein [Populus trichocarpa] gi|222847872|gb|EEE85419.1|
           predicted protein [Populus trichocarpa]
          Length = 1031

 Score =  111 bits (278), Expect = 5e-23
 Identities = 54/89 (60%), Positives = 66/89 (74%)
 Frame = +3

Query: 15  MEFEKRKAATLTSISSTELDKSPKGTIDTPIIPLLKTINNHPSYFTTSSCSGRISILLQP 194
           MEFEKRKAATL+S++S++ DKSPKGT+DT +IPL+ TIN+HPSYFTTSSCSGR+SIL QP
Sbjct: 1   MEFEKRKAATLSSLASSKTDKSPKGTVDTHLIPLINTINSHPSYFTTSSCSGRVSILSQP 60

Query: 195 LPQXXXXXXXXXXXXXXWLFITHELAKAN 281
                            WLFI+H+LA  N
Sbjct: 61  KWTPTPPTSKKKARGGSWLFISHDLANPN 89


>ref|XP_003529632.1| PREDICTED: tRNA wybutosine-synthesizing protein 2/3/4-like [Glycine
           max]
          Length = 1068

 Score =  109 bits (272), Expect = 3e-22
 Identities = 54/93 (58%), Positives = 66/93 (70%)
 Frame = +3

Query: 9   QKMEFEKRKAATLTSISSTELDKSPKGTIDTPIIPLLKTINNHPSYFTTSSCSGRISILL 188
           ++MEFEKRKAATL S+SSTE DKSPKG++D  I+PLL T+N +PSYFTTSSCSGRISIL 
Sbjct: 22  KRMEFEKRKAATLASLSSTESDKSPKGSLDAAIVPLLNTLNQNPSYFTTSSCSGRISILA 81

Query: 189 QPLPQXXXXXXXXXXXXXXWLFITHELAKANIV 287
           QPL                WLF++H+ A  + V
Sbjct: 82  QPLSLSDSPNPKKKARGGTWLFVSHDPADPDSV 114


>ref|XP_003610434.1| tRNA wybutosine-synthesizing protein 2/3/4 [Medicago truncatula]
           gi|355511489|gb|AES92631.1| tRNA wybutosine-synthesizing
           protein 2/3/4 [Medicago truncatula]
          Length = 1046

 Score =  109 bits (272), Expect = 3e-22
 Identities = 52/91 (57%), Positives = 65/91 (71%)
 Frame = +3

Query: 15  MEFEKRKAATLTSISSTELDKSPKGTIDTPIIPLLKTINNHPSYFTTSSCSGRISILLQP 194
           MEFEKRK+ATL S++STE DKSPKG++DTPIIPL+ T+N +P+YFTTSSCSGRISIL QP
Sbjct: 1   MEFEKRKSATLASLNSTESDKSPKGSLDTPIIPLINTLNQNPNYFTTSSCSGRISILSQP 60

Query: 195 LPQXXXXXXXXXXXXXXWLFITHELAKANIV 287
           L                WLF++H  A  + +
Sbjct: 61  LSPIPSPQTKKKAKGGTWLFVSHHTANPDSI 91