BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00042536
         (272 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269573.2| PREDICTED: pentatricopeptide repeat-containi...    62   6e-08
emb|CBI38763.3| unnamed protein product [Vitis vinifera]               62   6e-08
emb|CAN61868.1| hypothetical protein VITISV_002466 [Vitis vinifera]    62   6e-08
ref|XP_003564788.1| PREDICTED: pentatricopeptide repeat-containi...    60   2e-07
ref|XP_003520055.1| PREDICTED: pentatricopeptide repeat-containi...    60   2e-07

>ref|XP_002269573.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Vitis vinifera]
          Length = 786

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 23/31 (74%), Positives = 26/31 (83%)
 Frame = +2

Query: 5   VSSVYQRRIVLRDSNCFHHFREGICSCRDYW 97
           VS V+ R ++LRDSNCFHHFREG CSC DYW
Sbjct: 756 VSGVFHRHVILRDSNCFHHFREGACSCSDYW 786


>emb|CBI38763.3| unnamed protein product [Vitis vinifera]
          Length = 719

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 23/31 (74%), Positives = 26/31 (83%)
 Frame = +2

Query: 5   VSSVYQRRIVLRDSNCFHHFREGICSCRDYW 97
           VS V+ R ++LRDSNCFHHFREG CSC DYW
Sbjct: 689 VSGVFHRHVILRDSNCFHHFREGACSCSDYW 719


>emb|CAN61868.1| hypothetical protein VITISV_002466 [Vitis vinifera]
          Length = 440

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 23/31 (74%), Positives = 26/31 (83%)
 Frame = +2

Query: 5   VSSVYQRRIVLRDSNCFHHFREGICSCRDYW 97
           VS V+ R ++LRDSNCFHHFREG CSC DYW
Sbjct: 410 VSGVFHRHVILRDSNCFHHFREGACSCSDYW 440


>ref|XP_003564788.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Brachypodium distachyon]
          Length = 515

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 22/32 (68%), Positives = 27/32 (84%)
 Frame = +2

Query: 2   LVSSVYQRRIVLRDSNCFHHFREGICSCRDYW 97
           +V+ VY R I+LRDSNCFHH R+G+CSC DYW
Sbjct: 484 MVAKVYGREIILRDSNCFHHMRDGVCSCGDYW 515


>ref|XP_003520055.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 852

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 22/31 (70%), Positives = 26/31 (83%)
 Frame = +2

Query: 5   VSSVYQRRIVLRDSNCFHHFREGICSCRDYW 97
           +S V+ R I+LRDSNCFHHF+EG CSC DYW
Sbjct: 822 ISGVFTRHIILRDSNCFHHFKEGECSCEDYW 852