BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00042519
         (242 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15852.3| unnamed protein product [Vitis vinifera]              105   3e-21
emb|CBI25399.3| unnamed protein product [Vitis vinifera]              101   7e-20
ref|XP_002274158.1| PREDICTED: pentatricopeptide repeat-containi...   101   7e-20
ref|XP_002866443.1| hypothetical protein ARALYDRAFT_919404 [Arab...    95   7e-18
ref|XP_004160754.1| PREDICTED: pentatricopeptide repeat-containi...    89   3e-16

>emb|CBI15852.3| unnamed protein product [Vitis vinifera]
          Length = 595

 Score =  105 bits (263), Expect = 3e-21
 Identities = 48/79 (60%), Positives = 64/79 (81%)
 Frame = +1

Query: 1   PNVTTFASILKSVANLGDIDKGRKVHNYVNELGLESNIQVGTALINMYSKCGYLDDARTL 180
           PN+ TF+S+LK+V  + D  KGR+VH+ V E G+ESN+ VGT+LI+MYSKCG+L DAR++
Sbjct: 277 PNMYTFSSVLKAVGKIRDATKGREVHHCVMEYGMESNVVVGTSLIDMYSKCGHLSDARSV 336

Query: 181 FDRNYADCKLNLPWNAMIS 237
           FDRN+   K+N PWNAMIS
Sbjct: 337 FDRNFYKSKVNNPWNAMIS 355


>emb|CBI25399.3| unnamed protein product [Vitis vinifera]
          Length = 846

 Score =  101 bits (251), Expect = 7e-20
 Identities = 45/80 (56%), Positives = 61/80 (76%)
 Frame = +1

Query: 1   PNVTTFASILKSVANLGDIDKGRKVHNYVNELGLESNIQVGTALINMYSKCGYLDDARTL 180
           PN+ T  S+ K+V  L D++ G++V N  +ELG+E N+ VGTALI+MYSKCG L DAR++
Sbjct: 266 PNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGTALIDMYSKCGSLHDARSV 325

Query: 181 FDRNYADCKLNLPWNAMISG 240
           FD N+ +C +N PWNAMISG
Sbjct: 326 FDTNFINCGVNTPWNAMISG 345



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 33/84 (39%), Positives = 53/84 (63%), Gaps = 4/84 (4%)
 Frame = +1

Query: 1   PNVTTFASILKSVANLGDIDKGRKVHNYVNELGLESNIQVGTALINMYSKCGYLDDARTL 180
           PN  TF+S+L S A+L  ++ GR+VH  + + GL++   + +ALI+MY+KCG + +A  +
Sbjct: 471 PNQFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKV 530

Query: 181 FDRNYADCKLNLP----WNAMISG 240
           FD      K++ P    W A+ISG
Sbjct: 531 FD------KISNPDIVSWTAIISG 548


>ref|XP_002274158.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 820

 Score =  101 bits (251), Expect = 7e-20
 Identities = 45/80 (56%), Positives = 61/80 (76%)
 Frame = +1

Query: 1   PNVTTFASILKSVANLGDIDKGRKVHNYVNELGLESNIQVGTALINMYSKCGYLDDARTL 180
           PN+ T  S+ K+V  L D++ G++V N  +ELG+E N+ VGTALI+MYSKCG L DAR++
Sbjct: 320 PNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGTALIDMYSKCGSLHDARSV 379

Query: 181 FDRNYADCKLNLPWNAMISG 240
           FD N+ +C +N PWNAMISG
Sbjct: 380 FDTNFINCGVNTPWNAMISG 399



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 33/84 (39%), Positives = 53/84 (63%), Gaps = 4/84 (4%)
 Frame = +1

Query: 1   PNVTTFASILKSVANLGDIDKGRKVHNYVNELGLESNIQVGTALINMYSKCGYLDDARTL 180
           PN  TF+S+L S A+L  ++ GR+VH  + + GL++   + +ALI+MY+KCG + +A  +
Sbjct: 525 PNQFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKV 584

Query: 181 FDRNYADCKLNLP----WNAMISG 240
           FD      K++ P    W A+ISG
Sbjct: 585 FD------KISNPDIVSWTAIISG 602


>ref|XP_002866443.1| hypothetical protein ARALYDRAFT_919404 [Arabidopsis lyrata subsp.
           lyrata] gi|297312278|gb|EFH42702.1| hypothetical protein
           ARALYDRAFT_919404 [Arabidopsis lyrata subsp. lyrata]
          Length = 749

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 40/80 (50%), Positives = 61/80 (76%)
 Frame = +1

Query: 1   PNVTTFASILKSVANLGDIDKGRKVHNYVNELGLESNIQVGTALINMYSKCGYLDDARTL 180
           PNV  F S+ K++  LGD++KGR ++    E+G++SNI VGTALI+M++KCG + ++ ++
Sbjct: 263 PNVACFISVSKAIGQLGDVEKGRYINRIAFEIGMQSNIHVGTALIDMFAKCGCVTESWSV 322

Query: 181 FDRNYADCKLNLPWNAMISG 240
           F  N++ C +NLPWNAMISG
Sbjct: 323 FVSNFSGCGVNLPWNAMISG 342


>ref|XP_004160754.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Cucumis sativus]
          Length = 766

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 39/80 (48%), Positives = 57/80 (71%)
 Frame = +1

Query: 1   PNVTTFASILKSVANLGDIDKGRKVHNYVNELGLESNIQVGTALINMYSKCGYLDDARTL 180
           P+  TF  + K++  L D++K ++V  Y  ELG++SN  VGTALI+M SKCG L +AR++
Sbjct: 270 PDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTLVGTALIDMNSKCGSLQEARSI 329

Query: 181 FDRNYADCKLNLPWNAMISG 240
           F+ ++  C+ N PWNAMISG
Sbjct: 330 FNSHFITCRFNAPWNAMISG 349



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 33/81 (40%), Positives = 56/81 (69%), Gaps = 1/81 (1%)
 Frame = +1

Query: 1   PNVTTFASILKSVANLGDIDKGRKVHNYVNELGLESNIQVGTALINMYSKCGYLDDARTL 180
           PN  TF+S+L S ANL  ++ G++VH  + ++GL+ +  + +AL++MY+KCG L DA+ +
Sbjct: 475 PNQFTFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKV 534

Query: 181 FDR-NYADCKLNLPWNAMISG 240
           F+R + AD    + W A+I+G
Sbjct: 535 FNRISNAD---TVSWTAIIAG 552