BLASTX nr result

ID: Coptis23_contig00042475 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00042475
         (332 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311660.1| magnesium transporter [Populus trichocarpa] ...    85   5e-15
ref|XP_002517021.1| RNA splicing protein mrs2, mitochondrial, pu...    83   2e-14
ref|XP_003559849.1| PREDICTED: magnesium transporter MRS2-I-like...    83   3e-14
ref|XP_002284188.1| PREDICTED: magnesium transporter MRS2-I isof...    81   1e-13
ref|XP_002284181.1| PREDICTED: magnesium transporter MRS2-I isof...    81   1e-13

>ref|XP_002311660.1| magnesium transporter [Populus trichocarpa]
           gi|222851480|gb|EEE89027.1| magnesium transporter
           [Populus trichocarpa]
          Length = 394

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 36/53 (67%), Positives = 46/53 (86%)
 Frame = +1

Query: 1   SLVAGIFGMSIKYPWNENHGYMFKWVVIVTSIVCAAIYILIIFSARRKGLIGS 159
           SLVAGIFGM+I Y WN+NHGYMFKWVVIVT + CA+++I+++  AR KGL+GS
Sbjct: 342 SLVAGIFGMNIPYTWNDNHGYMFKWVVIVTGVFCASLFIVLMTYARHKGLVGS 394


>ref|XP_002517021.1| RNA splicing protein mrs2, mitochondrial, putative [Ricinus
           communis] gi|223543656|gb|EEF45184.1| RNA splicing
           protein mrs2, mitochondrial, putative [Ricinus communis]
          Length = 398

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 38/53 (71%), Positives = 45/53 (84%)
 Frame = +1

Query: 1   SLVAGIFGMSIKYPWNENHGYMFKWVVIVTSIVCAAIYILIIFSARRKGLIGS 159
           SLVAGIFGM+I Y WN+N+GYMFKWVVIVT   CAA++ILI+  AR KGL+GS
Sbjct: 346 SLVAGIFGMNIPYTWNDNYGYMFKWVVIVTGACCAAMFILIMSYARYKGLVGS 398


>ref|XP_003559849.1| PREDICTED: magnesium transporter MRS2-I-like [Brachypodium
           distachyon]
          Length = 387

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 33/53 (62%), Positives = 45/53 (84%)
 Frame = +1

Query: 1   SLVAGIFGMSIKYPWNENHGYMFKWVVIVTSIVCAAIYILIIFSARRKGLIGS 159
           SLVAGIFGM+I Y WNENHGY+FKWVV+++ +VCA +++ ++  AR KGL+GS
Sbjct: 335 SLVAGIFGMNIPYTWNENHGYIFKWVVLISGLVCALMFVFVVAYARHKGLVGS 387


>ref|XP_002284188.1| PREDICTED: magnesium transporter MRS2-I isoform 2 [Vitis vinifera]
          Length = 374

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 34/53 (64%), Positives = 45/53 (84%)
 Frame = +1

Query: 1   SLVAGIFGMSIKYPWNENHGYMFKWVVIVTSIVCAAIYILIIFSARRKGLIGS 159
           SLVAGIFGM+I Y WN++HG+MFKWVVIVT + CA ++++I+  AR KGL+GS
Sbjct: 322 SLVAGIFGMNIPYTWNDDHGFMFKWVVIVTGVSCALLFVVIMSYARHKGLVGS 374


>ref|XP_002284181.1| PREDICTED: magnesium transporter MRS2-I isoform 1 [Vitis vinifera]
           gi|297737159|emb|CBI26360.3| unnamed protein product
           [Vitis vinifera]
          Length = 389

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 34/53 (64%), Positives = 45/53 (84%)
 Frame = +1

Query: 1   SLVAGIFGMSIKYPWNENHGYMFKWVVIVTSIVCAAIYILIIFSARRKGLIGS 159
           SLVAGIFGM+I Y WN++HG+MFKWVVIVT + CA ++++I+  AR KGL+GS
Sbjct: 337 SLVAGIFGMNIPYTWNDDHGFMFKWVVIVTGVSCALLFVVIMSYARHKGLVGS 389


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