BLASTX nr result

ID: Coptis23_contig00042462 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00042462
         (272 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303513.1| predicted protein [Populus trichocarpa] gi|2...    68   7e-10
ref|XP_002265516.2| PREDICTED: uncharacterized protein LOC100257...    66   3e-09
emb|CAN64504.1| hypothetical protein VITISV_016997 [Vitis vinifera]    65   4e-09
ref|XP_003538725.1| PREDICTED: uncharacterized protein LOC100804...    62   4e-08
emb|CBI31898.3| unnamed protein product [Vitis vinifera]               61   8e-08

>ref|XP_002303513.1| predicted protein [Populus trichocarpa] gi|222840945|gb|EEE78492.1|
           predicted protein [Populus trichocarpa]
          Length = 277

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 36/64 (56%), Positives = 45/64 (70%)
 Frame = -2

Query: 193 HSKSTKSNTPDSDSVPRARTTKRSTDPFFPTLTELPEENPSHNVVRIIFHTSWSPVNSFS 14
           H++   ++ P S   PR+ +T R+TDP FP LTELP+ +PS NVV IIFHTSWS   SF 
Sbjct: 62  HNQQKPTSNPVSTPPPRSLST-RNTDPVFPALTELPDGHPSRNVVDIIFHTSWSN-KSFP 119

Query: 13  GRIE 2
           GRIE
Sbjct: 120 GRIE 123


>ref|XP_002265516.2| PREDICTED: uncharacterized protein LOC100257409 [Vitis vinifera]
          Length = 286

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 38/69 (55%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
 Frame = -2

Query: 193 HSKSTKSNTPDSDSVPRARTT-----KRSTDPFFPTLTELPEENPSHNVVRIIFHTSWSP 29
           H +S K   P S  V RAR +      R   PFFP L E+PE +PS NVV IIFHTSWSP
Sbjct: 67  HQRSPKPE-PGSAPVSRARQSVSARPARPAAPFFPALAEMPEGHPSRNVVEIIFHTSWSP 125

Query: 28  VNSFSGRIE 2
             +FSGRIE
Sbjct: 126 -KAFSGRIE 133


>emb|CAN64504.1| hypothetical protein VITISV_016997 [Vitis vinifera]
          Length = 317

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 38/69 (55%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
 Frame = -2

Query: 193 HSKSTKSNTPDSDSVPRARTT-----KRSTDPFFPTLTELPEENPSHNVVRIIFHTSWSP 29
           H +S K   P S  V RAR +      R   PFFP L E+PE +PS NVV IIFHTSWSP
Sbjct: 67  HQRSPKPE-PGSAPVSRARQSVSARPARPAAPFFPALXEMPEGHPSRNVVEIIFHTSWSP 125

Query: 28  VNSFSGRIE 2
             +FSGRIE
Sbjct: 126 -KAFSGRIE 133


>ref|XP_003538725.1| PREDICTED: uncharacterized protein LOC100804686 [Glycine max]
          Length = 285

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 33/66 (50%), Positives = 41/66 (62%)
 Frame = -2

Query: 199 RYHSKSTKSNTPDSDSVPRARTTKRSTDPFFPTLTELPEENPSHNVVRIIFHTSWSPVNS 20
           RY S + K +   + +  R+ T  R  DP FP+LTEL E +PS NVV IIFHTSW P   
Sbjct: 66  RYPSSAAKPDFETTINRSRSVTATRHADPRFPSLTELTEGHPSRNVVEIIFHTSWGP-KP 124

Query: 19  FSGRIE 2
           FSG +E
Sbjct: 125 FSGLVE 130


>emb|CBI31898.3| unnamed protein product [Vitis vinifera]
          Length = 230

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 29/42 (69%), Positives = 32/42 (76%)
 Frame = -2

Query: 127 RSTDPFFPTLTELPEENPSHNVVRIIFHTSWSPVNSFSGRIE 2
           R   PFFP L E+PE +PS NVV IIFHTSWSP  +FSGRIE
Sbjct: 81  RPAAPFFPALAEMPEGHPSRNVVEIIFHTSWSP-KAFSGRIE 121


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