BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00042461
         (438 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522492.1| conserved hypothetical protein [Ricinus comm...   100   9e-20
ref|XP_002315026.1| predicted protein [Populus trichocarpa] gi|2...    96   3e-18
ref|XP_002267888.1| PREDICTED: uncharacterized protein LOC100248...    95   7e-18
ref|XP_003607775.1| ATP synthase subunit beta [Medicago truncatu...    94   1e-17
ref|XP_002887236.1| predicted protein [Arabidopsis lyrata subsp....    93   2e-17

>ref|XP_002522492.1| conserved hypothetical protein [Ricinus communis]
           gi|223538377|gb|EEF39984.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 363

 Score =  100 bits (250), Expect = 9e-20
 Identities = 59/92 (64%), Positives = 69/92 (75%), Gaps = 3/92 (3%)
 Frame = -2

Query: 269 DGSSE---EKNELGSPDANLRRSFSINERFDSMNAMEILRETIRILRYNCPGFMVIAALL 99
           +GSS+   +  ELG  D N   +   N +F SMNA+EILRET+RILR N   FM+IAALL
Sbjct: 21  EGSSDAQVQSFELGLYDDNDGHN---NHQFHSMNALEILRETVRILRCNSSSFMIIAALL 77

Query: 98  ICPVSAIILSNVLVDQSFFKRLTIRLLLVAQS 3
           ICPVSAI+LSNV VDQS  KRLTIRLLLVA+S
Sbjct: 78  ICPVSAIVLSNVFVDQSIVKRLTIRLLLVAKS 109


>ref|XP_002315026.1| predicted protein [Populus trichocarpa] gi|222864066|gb|EEF01197.1|
           predicted protein [Populus trichocarpa]
          Length = 350

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 56/92 (60%), Positives = 69/92 (75%), Gaps = 3/92 (3%)
 Frame = -2

Query: 269 DGSSE---EKNELGSPDANLRRSFSINERFDSMNAMEILRETIRILRYNCPGFMVIAALL 99
           +GS E   + +EL S D + R     N +F SM+A+EILRET+RILR N   FM IAALL
Sbjct: 9   EGSEETHLQNSELESSDFSDRH----NHQFHSMSALEILRETVRILRCNSWSFMTIAALL 64

Query: 98  ICPVSAIILSNVLVDQSFFKRLTIRLLLVAQS 3
           ICPVSAI+LSNVLVDQS  K+L++RLLLVA+S
Sbjct: 65  ICPVSAILLSNVLVDQSIVKKLSVRLLLVAKS 96


>ref|XP_002267888.1| PREDICTED: uncharacterized protein LOC100248804 [Vitis vinifera]
          Length = 347

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 48/62 (77%), Positives = 56/62 (90%)
 Frame = -2

Query: 188 DSMNAMEILRETIRILRYNCPGFMVIAALLICPVSAIILSNVLVDQSFFKRLTIRLLLVA 9
           D MNA++ILRET+ ILRYN  GFM+IAALLICPVSA++LSNVLVDQS  KRL+IRLLLVA
Sbjct: 36  DPMNALQILRETVWILRYNSSGFMLIAALLICPVSALLLSNVLVDQSIVKRLSIRLLLVA 95

Query: 8   QS 3
           +S
Sbjct: 96  RS 97


>ref|XP_003607775.1| ATP synthase subunit beta [Medicago truncatula]
           gi|355508830|gb|AES89972.1| ATP synthase subunit beta
           [Medicago truncatula]
          Length = 409

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 49/84 (58%), Positives = 63/84 (75%), Gaps = 5/84 (5%)
 Frame = -2

Query: 239 GSPDANLRRSFSI-----NERFDSMNAMEILRETIRILRYNCPGFMVIAALLICPVSAII 75
           GS +  LR++  +     N    SMNA++ILRETIRILR+N   FM+IA LLICPVSA++
Sbjct: 21  GSDETRLRQALELELSDHNHEIQSMNALDILRETIRILRFNSWAFMIIAFLLICPVSAVL 80

Query: 74  LSNVLVDQSFFKRLTIRLLLVAQS 3
           LSNVLVD+S  K LTIRL+LVA++
Sbjct: 81  LSNVLVDESIVKNLTIRLMLVAET 104


>ref|XP_002887236.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297333077|gb|EFH63495.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 348

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 52/88 (59%), Positives = 65/88 (73%)
 Frame = -2

Query: 266 GSSEEKNELGSPDANLRRSFSINERFDSMNAMEILRETIRILRYNCPGFMVIAALLICPV 87
           GS   K E+ S  ++   S S + +F SMNA+EILRET+RILRYN   FM+IA LLICPV
Sbjct: 14  GSKFRKFEIESSSSS---SSSSDHQFHSMNALEILRETVRILRYNLGAFMLIALLLICPV 70

Query: 86  SAIILSNVLVDQSFFKRLTIRLLLVAQS 3
           SAI+L N+LVDQS    LT+RLLLV++S
Sbjct: 71  SAILLPNLLVDQSVVNSLTVRLLLVSKS 98