BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00042435
         (270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002874609.1| hypothetical protein ARALYDRAFT_489854 [Arab...    59   5e-07
gb|ABK28056.1| unknown [Arabidopsis thaliana]                          58   7e-07
ref|NP_001118969.1| F-box family protein [Arabidopsis thaliana] ...    58   7e-07
ref|XP_002874641.1| hypothetical protein ARALYDRAFT_489914 [Arab...    55   6e-06
gb|ABK28372.1| unknown [Arabidopsis thaliana]                          55   8e-06

>ref|XP_002874609.1| hypothetical protein ARALYDRAFT_489854 [Arabidopsis lyrata subsp.
           lyrata] gi|297320446|gb|EFH50868.1| hypothetical protein
           ARALYDRAFT_489854 [Arabidopsis lyrata subsp. lyrata]
          Length = 307

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 28/59 (47%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
 Frame = +1

Query: 97  PWLLSFPKNTKDVCKFSHPIYSDAYTMNIPELAGAIVRHANYGWLLMSKGNSC-IFFFN 270
           PW ++FPK+  D+  F  P+    YT+N+PELAG  V ++ YGWLLM + N   +FFFN
Sbjct: 29  PWFITFPKHD-DLTIFIDPLERKRYTLNLPELAGTDVCYSKYGWLLMRRSNLVDMFFFN 86


>gb|ABK28056.1| unknown [Arabidopsis thaliana]
          Length = 139

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
 Frame = +1

Query: 1   RFRLTCKAWTSINKPVRSYSLLMQSKSDSQQIPWLLSFPKNTKDVCKFSHPIYSDAYTMN 180
           R    CK+W  +   VR            ++ PWL+ FPK   ++ +F  P++   YT+ 
Sbjct: 32  RASAACKSWYEVGVSVRVV----------EKHPWLICFPKRG-NLFEFRDPLHWKLYTLG 80

Query: 181 IPELAGAIVRHANYGWLLMSKGNS-CIFFFN 270
           +PELA + V ++ +GWLLM K  S  +FFFN
Sbjct: 81  LPELAESTVCYSRFGWLLMRKATSKDVFFFN 111


>ref|NP_001118969.1| F-box family protein [Arabidopsis thaliana]
           gi|186511695|ref|NP_001118970.1| F-box family protein
           [Arabidopsis thaliana]
           gi|122231455|sp|Q1G3I7.1|FB232_ARATH RecName: Full=F-box
           protein At4g12382 gi|98962113|gb|ABF59386.1| unknown
           protein [Arabidopsis thaliana]
           gi|332657722|gb|AEE83122.1| F-box family protein
           [Arabidopsis thaliana] gi|332657723|gb|AEE83123.1| F-box
           family protein [Arabidopsis thaliana]
          Length = 138

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
 Frame = +1

Query: 1   RFRLTCKAWTSINKPVRSYSLLMQSKSDSQQIPWLLSFPKNTKDVCKFSHPIYSDAYTMN 180
           R    CK+W  +   VR            ++ PWL+ FPK   ++ +F  P++   YT+ 
Sbjct: 32  RASAACKSWYEVGVSVRVV----------EKHPWLICFPKRG-NLFEFRDPLHWKLYTLG 80

Query: 181 IPELAGAIVRHANYGWLLMSKGNS-CIFFFN 270
           +PELA + V ++ +GWLLM K  S  +FFFN
Sbjct: 81  LPELAESTVCYSRFGWLLMRKATSKDVFFFN 111


>ref|XP_002874641.1| hypothetical protein ARALYDRAFT_489914 [Arabidopsis lyrata subsp.
           lyrata] gi|297320478|gb|EFH50900.1| hypothetical protein
           ARALYDRAFT_489914 [Arabidopsis lyrata subsp. lyrata]
          Length = 204

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 33/91 (36%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
 Frame = +1

Query: 1   RFRLTCKAWTSINKPVRSYSLLMQSKSDSQQIPWLLSFPKNTKDVCKFSHPIYSDAYTMN 180
           R    CKAW    + VR            ++ PW+++FPK+  D+     P+    YT+N
Sbjct: 11  RASAVCKAWRKAAESVRVV----------EKHPWVITFPKHD-DLTILFDPLERKRYTLN 59

Query: 181 IPELAGAIVRHANYGWLLMSK-GNSCIFFFN 270
           +PELAG  V ++  GWLLM + G   +FFFN
Sbjct: 60  LPELAGTNVCYSKDGWLLMRRSGLVDMFFFN 90


>gb|ABK28372.1| unknown [Arabidopsis thaliana]
          Length = 389

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 31/91 (34%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
 Frame = +1

Query: 1   RFRLTCKAWTSINKPVRSYSLLMQSKSDSQQIPWLLSFPKNTKDVCKFSHPIYSDAYTMN 180
           R    CK+W      VR             + PWL+ FPK   ++ +F  P++   +T++
Sbjct: 67  RASAACKSWYEAGVSVRVVD----------KHPWLMCFPKRG-NLFEFRDPLHWKLHTLD 115

Query: 181 IPELAGAIVRHANYGWLLMSKGNS-CIFFFN 270
           +PELA + V ++ +GWLLM K +S  +FFFN
Sbjct: 116 LPELAESTVCYSRFGWLLMRKASSNDVFFFN 146