BLASTX nr result

ID: Coptis23_contig00042421 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00042421
         (455 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279357.2| PREDICTED: U-box domain-containing protein 3...   162   9e-41
emb|CBI20673.3| unnamed protein product [Vitis vinifera]              162   9e-41
ref|XP_002880578.1| kinase [Arabidopsis lyrata subsp. lyrata] gi...   148   2e-40
dbj|BAK03904.1| predicted protein [Hordeum vulgare subsp. vulgar...   169   3e-40
gb|AAD18110.1| putative protein kinase [Arabidopsis thaliana]         147   3e-40

>ref|XP_002279357.2| PREDICTED: U-box domain-containing protein 35-like [Vitis vinifera]
          Length = 782

 Score =  162 bits (409), Expect(2) = 9e-41
 Identities = 78/105 (74%), Positives = 89/105 (84%)
 Frame = +2

Query: 140 YDIEEIEIATDNFSDSLKIDEGGYGTVYRAELHHTPFAIKVLRSDAAQGMKQFQQEVEVL 319
           Y IEEIE+AT+ FS ++KI EGGYG VYR +L HTP AIKVLR DAAQGM+QFQQE+EVL
Sbjct: 397 YAIEEIEVATEKFSQAMKIGEGGYGPVYRGKLDHTPVAIKVLRPDAAQGMRQFQQEIEVL 456

Query: 320 SCIRHPNMVLLLGASLES*CLVYEYMDNGSLEERLFRKGGTPTIP 454
           SC+RHPNMVLLLGA  E  CLVYEYM NGSLE+RL R+G TP+IP
Sbjct: 457 SCMRHPNMVLLLGACPEYGCLVYEYMSNGSLEDRLLRRGDTPSIP 501



 Score = 30.0 bits (66), Expect(2) = 9e-41
 Identities = 12/37 (32%), Positives = 26/37 (70%)
 Frame = +1

Query: 31  KRISELETKRQKGVEMKALTQAAAKTKVLTALPNSNI 141
           ++++E E +R++  E+KA  +A  K + LTAL ++++
Sbjct: 356 QKLAEKEAQRRRYAELKASREAEEKARALTALAHNDV 392


>emb|CBI20673.3| unnamed protein product [Vitis vinifera]
          Length = 665

 Score =  162 bits (409), Expect(2) = 9e-41
 Identities = 78/105 (74%), Positives = 89/105 (84%)
 Frame = +2

Query: 140 YDIEEIEIATDNFSDSLKIDEGGYGTVYRAELHHTPFAIKVLRSDAAQGMKQFQQEVEVL 319
           Y IEEIE+AT+ FS ++KI EGGYG VYR +L HTP AIKVLR DAAQGM+QFQQE+EVL
Sbjct: 414 YAIEEIEVATEKFSQAMKIGEGGYGPVYRGKLDHTPVAIKVLRPDAAQGMRQFQQEIEVL 473

Query: 320 SCIRHPNMVLLLGASLES*CLVYEYMDNGSLEERLFRKGGTPTIP 454
           SC+RHPNMVLLLGA  E  CLVYEYM NGSLE+RL R+G TP+IP
Sbjct: 474 SCMRHPNMVLLLGACPEYGCLVYEYMSNGSLEDRLLRRGDTPSIP 518



 Score = 30.0 bits (66), Expect(2) = 9e-41
 Identities = 12/37 (32%), Positives = 26/37 (70%)
 Frame = +1

Query: 31  KRISELETKRQKGVEMKALTQAAAKTKVLTALPNSNI 141
           ++++E E +R++  E+KA  +A  K + LTAL ++++
Sbjct: 373 QKLAEKEAQRRRYAELKASREAEEKARALTALAHNDV 409


>ref|XP_002880578.1| kinase [Arabidopsis lyrata subsp. lyrata]
           gi|297326417|gb|EFH56837.1| kinase [Arabidopsis lyrata
           subsp. lyrata]
          Length = 788

 Score =  148 bits (374), Expect(2) = 2e-40
 Identities = 73/104 (70%), Positives = 83/104 (79%)
 Frame = +2

Query: 140 YDIEEIEIATDNFSDSLKIDEGGYGTVYRAELHHTPFAIKVLRSDAAQGMKQFQQEVEVL 319
           Y IEEIE+AT+ F++  KI EGGYG VY+  L HTP A+KVLR DAAQG  QFQQEVEVL
Sbjct: 468 YSIEEIELATEFFAEKYKIGEGGYGPVYKCYLDHTPVAVKVLRPDAAQGRSQFQQEVEVL 527

Query: 320 SCIRHPNMVLLLGASLES*CLVYEYMDNGSLEERLFRKGGTPTI 451
           SCIRHPNMVLLLGA  E  CLVYE+M NGSLE+RLFR G +P +
Sbjct: 528 SCIRHPNMVLLLGACPECGCLVYEFMANGSLEDRLFRLGNSPPL 571



 Score = 42.7 bits (99), Expect(2) = 2e-40
 Identities = 20/37 (54%), Positives = 28/37 (75%)
 Frame = +1

Query: 31  KRISELETKRQKGVEMKALTQAAAKTKVLTALPNSNI 141
           +RI+ELE K++   EMKAL ++  KTK LTAL NS++
Sbjct: 427 QRIAELEAKKRVNAEMKALKESEEKTKALTALANSDV 463


>dbj|BAK03904.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326524888|dbj|BAK04380.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 748

 Score =  169 bits (427), Expect = 3e-40
 Identities = 83/105 (79%), Positives = 91/105 (86%)
 Frame = +2

Query: 140 YDIEEIEIATDNFSDSLKIDEGGYGTVYRAELHHTPFAIKVLRSDAAQGMKQFQQEVEVL 319
           Y+I+EIEIAT+ FS+SLKI EGGYG VY A L HTP AIKVLR DA QG KQFQQEVEVL
Sbjct: 428 YNIDEIEIATERFSESLKIGEGGYGPVYSASLDHTPVAIKVLRPDAQQGRKQFQQEVEVL 487

Query: 320 SCIRHPNMVLLLGASLES*CLVYEYMDNGSLEERLFRKGGTPTIP 454
           SCIRHPNMVLLLGA  E  CLVYEYM+NGSLE+RLFR+GGTPT+P
Sbjct: 488 SCIRHPNMVLLLGACPEYGCLVYEYMENGSLEDRLFRRGGTPTLP 532


>gb|AAD18110.1| putative protein kinase [Arabidopsis thaliana]
          Length = 816

 Score =  147 bits (371), Expect(2) = 3e-40
 Identities = 72/104 (69%), Positives = 83/104 (79%)
 Frame = +2

Query: 140 YDIEEIEIATDNFSDSLKIDEGGYGTVYRAELHHTPFAIKVLRSDAAQGMKQFQQEVEVL 319
           Y IE+IE+AT+ F++  KI EGGYG VY+  L HTP A+KVLR DAAQG  QFQQEVEVL
Sbjct: 468 YSIEDIELATEFFAEKYKIGEGGYGPVYKCYLDHTPVAVKVLRPDAAQGRSQFQQEVEVL 527

Query: 320 SCIRHPNMVLLLGASLES*CLVYEYMDNGSLEERLFRKGGTPTI 451
           SCIRHPNMVLLLGA  E  CLVYE+M NGSLE+RLFR G +P +
Sbjct: 528 SCIRHPNMVLLLGACPECGCLVYEFMANGSLEDRLFRLGNSPPL 571



 Score = 42.7 bits (99), Expect(2) = 3e-40
 Identities = 20/37 (54%), Positives = 28/37 (75%)
 Frame = +1

Query: 31  KRISELETKRQKGVEMKALTQAAAKTKVLTALPNSNI 141
           +RI+ELE K++   EMKAL ++  KTK LTAL NS++
Sbjct: 427 QRIAELEAKKRVNAEMKALKESEEKTKALTALANSDV 463


Top