BLASTX nr result

ID: Coptis23_contig00042418 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00042418
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317496.1| predicted protein [Populus trichocarpa] gi|2...   155   4e-36
ref|XP_002533903.1| ATP binding protein, putative [Ricinus commu...   151   6e-35
ref|XP_002282528.1| PREDICTED: dynamin-like protein C-like [Viti...   143   1e-32
ref|XP_004141359.1| PREDICTED: dynamin-related protein 5A-like [...   126   2e-27
gb|ABF70129.1| dynamin family protein [Musa balbisiana]               117   7e-25

>ref|XP_002317496.1| predicted protein [Populus trichocarpa] gi|222860561|gb|EEE98108.1|
           predicted protein [Populus trichocarpa]
          Length = 760

 Score =  155 bits (391), Expect = 4e-36
 Identities = 80/109 (73%), Positives = 86/109 (78%), Gaps = 1/109 (0%)
 Frame = -2

Query: 325 KDLAKQCKQLVRHHLDSVTSPYSQVCYENDFVGGFGSSSTS-IRFNQAQVSPFSIELSDG 149
           KDLAKQCKQLVRHHLDSVTSPYSQVCYENDF GGFG S+TS  +FNQ    PF +ELSD 
Sbjct: 554 KDLAKQCKQLVRHHLDSVTSPYSQVCYENDFQGGFGLSTTSCFKFNQVSAGPFYLELSDC 613

Query: 148 RAAYTEEGIGRDQENIPPERSAQQTTPGKTIEAKEVLGESQMTVPETPS 2
            A   +E   RDQENIPPE+  QQTTPGK  EA+E L ESQMTVPETPS
Sbjct: 614 GAPSRDE-TTRDQENIPPEKIVQQTTPGKVAEAREALKESQMTVPETPS 661


>ref|XP_002533903.1| ATP binding protein, putative [Ricinus communis]
           gi|223526136|gb|EEF28477.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 819

 Score =  151 bits (381), Expect = 6e-35
 Identities = 75/109 (68%), Positives = 87/109 (79%), Gaps = 1/109 (0%)
 Frame = -2

Query: 325 KDLAKQCKQLVRHHLDSVTSPYSQVCYENDFVGGFGSSSTS-IRFNQAQVSPFSIELSDG 149
           +DLAKQCKQLVRHHLDSVTSPYSQVCYEN+F GGFG S+ S  + NQA    F  ELSD 
Sbjct: 552 RDLAKQCKQLVRHHLDSVTSPYSQVCYENEFQGGFGLSAASYFKINQASAGSFCFELSDA 611

Query: 148 RAAYTEEGIGRDQENIPPERSAQQTTPGKTIEAKEVLGESQMTVPETPS 2
           + ++ +E + RDQENIPPE+  QQTTPGK ++AKE L ESQMTVPETPS
Sbjct: 612 KESFHDETM-RDQENIPPEKHVQQTTPGKGVDAKEALKESQMTVPETPS 659


>ref|XP_002282528.1| PREDICTED: dynamin-like protein C-like [Vitis vinifera]
          Length = 821

 Score =  143 bits (361), Expect = 1e-32
 Identities = 75/109 (68%), Positives = 86/109 (78%), Gaps = 1/109 (0%)
 Frame = -2

Query: 325 KDLAKQCKQLVRHHLDSVTSPYSQVCYENDFVGGFGSSSTSI-RFNQAQVSPFSIELSDG 149
           KDLAKQCKQLVRHHLDS TSPYSQVCYEN F GG GS  TS+ RF+Q  V  FS+ELS+G
Sbjct: 557 KDLAKQCKQLVRHHLDSATSPYSQVCYEN-FQGGSGSGVTSMYRFSQPLVGSFSLELSEG 615

Query: 148 RAAYTEEGIGRDQENIPPERSAQQTTPGKTIEAKEVLGESQMTVPETPS 2
             A   + + RDQENIPPE+ AQ+TTPGK +E +E L ESQ+TVPETPS
Sbjct: 616 GPALRHDKV-RDQENIPPEKDAQETTPGKGVETREALRESQLTVPETPS 663


>ref|XP_004141359.1| PREDICTED: dynamin-related protein 5A-like [Cucumis sativus]
           gi|449498717|ref|XP_004160614.1| PREDICTED:
           dynamin-related protein 5A-like [Cucumis sativus]
          Length = 820

 Score =  126 bits (316), Expect = 2e-27
 Identities = 66/108 (61%), Positives = 82/108 (75%)
 Frame = -2

Query: 325 KDLAKQCKQLVRHHLDSVTSPYSQVCYENDFVGGFGSSSTSIRFNQAQVSPFSIELSDGR 146
           KDLAKQCKQL+RHHLDSVTSPYS VCYENDF GG  S+++S +    ++S FS ELSD  
Sbjct: 559 KDLAKQCKQLLRHHLDSVTSPYSLVCYENDFEGGSLSNASSFQ-KINRISLFSFELSDCG 617

Query: 145 AAYTEEGIGRDQENIPPERSAQQTTPGKTIEAKEVLGESQMTVPETPS 2
               +E + +DQENIPPE++ QQ TPGK  E+++ L E Q+TVPETPS
Sbjct: 618 GVSRDETM-KDQENIPPEKNIQQITPGKGTESRDALRECQITVPETPS 664


>gb|ABF70129.1| dynamin family protein [Musa balbisiana]
          Length = 818

 Score =  117 bits (294), Expect = 7e-25
 Identities = 62/108 (57%), Positives = 76/108 (70%)
 Frame = -2

Query: 325 KDLAKQCKQLVRHHLDSVTSPYSQVCYENDFVGGFGSSSTSIRFNQAQVSPFSIELSDGR 146
           +DL+KQCK++V+HHL SVTSPYSQVCYEND VG  G      RFNQ   + F ++LSD +
Sbjct: 566 QDLSKQCKEIVQHHLSSVTSPYSQVCYENDLVGDVG------RFNQLSATSFVLDLSDAK 619

Query: 145 AAYTEEGIGRDQENIPPERSAQQTTPGKTIEAKEVLGESQMTVPETPS 2
                + +  DQENIPP +  Q +TPGK  EAK+ L ESQMTVPETPS
Sbjct: 620 -----DEMVADQENIPP-KDQQHSTPGKATEAKDPLRESQMTVPETPS 661


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