BLASTX nr result

ID: Coptis23_contig00042417 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00042417
         (271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002974429.1| hypothetical protein SELMODRAFT_101139 [Sela...   117   1e-24
ref|XP_002985727.1| hypothetical protein SELMODRAFT_122844 [Sela...   117   1e-24
gb|AAF82233.1|AC069143_9 Contains a strong similarity to a respi...   114   1e-23
gb|AAC39478.1| respiratory burst oxidase protein E [Arabidopsis ...   114   1e-23
ref|NP_173357.1| riboflavin synthase-like protein [Arabidopsis t...   114   1e-23

>ref|XP_002974429.1| hypothetical protein SELMODRAFT_101139 [Selaginella moellendorffii]
           gi|300158027|gb|EFJ24651.1| hypothetical protein
           SELMODRAFT_101139 [Selaginella moellendorffii]
          Length = 901

 Score =  117 bits (292), Expect = 1e-24
 Identities = 53/87 (60%), Positives = 74/87 (85%)
 Frame = +3

Query: 3   KTELHDYWCRITDTNFHSRTQIFFDLCDRNMDGKITEKEIKQVILLSASTNKLCITLEEA 182
           K +++D+W +I+D +F +R QIFFD+CD+N+DG+I+E+E+K+VI+LSAS N+L    E+A
Sbjct: 216 KRDMYDFWLQISDQSFDARMQIFFDMCDKNLDGRISEREVKEVIMLSASANRLSKLKEQA 275

Query: 183 QEHAALIMEELDDENRGYIELSQLETL 263
           +E+AALIMEELD EN GYIEL QLETL
Sbjct: 276 EEYAALIMEELDPENLGYIELWQLETL 302


>ref|XP_002985727.1| hypothetical protein SELMODRAFT_122844 [Selaginella moellendorffii]
           gi|300146636|gb|EFJ13305.1| hypothetical protein
           SELMODRAFT_122844 [Selaginella moellendorffii]
          Length = 902

 Score =  117 bits (292), Expect = 1e-24
 Identities = 53/87 (60%), Positives = 74/87 (85%)
 Frame = +3

Query: 3   KTELHDYWCRITDTNFHSRTQIFFDLCDRNMDGKITEKEIKQVILLSASTNKLCITLEEA 182
           K +++D+W +I+D +F +R QIFFD+CD+N+DG+I+E+E+K+VI+LSAS N+L    E+A
Sbjct: 217 KRDMYDFWLQISDQSFDARMQIFFDMCDKNLDGRISEREVKEVIMLSASANRLSKLKEQA 276

Query: 183 QEHAALIMEELDDENRGYIELSQLETL 263
           +E+AALIMEELD EN GYIEL QLETL
Sbjct: 277 EEYAALIMEELDPENLGYIELWQLETL 303


>gb|AAF82233.1|AC069143_9 Contains a strong similarity to a respiratory burst oxidase protein
           E (RbohE) from Arabidopsis thaliana gb|AF055356 and
           contains an EF hand PF|00036 and ferric reductase
           transmembrane component PF|01794 domains [Arabidopsis
           thaliana]
          Length = 932

 Score =  114 bits (284), Expect = 1e-23
 Identities = 55/87 (63%), Positives = 70/87 (80%)
 Frame = +3

Query: 3   KTELHDYWCRITDTNFHSRTQIFFDLCDRNMDGKITEKEIKQVILLSASTNKLCITLEEA 182
           K ELHD+W +I+D +F +R QIFFD+ D N DGKIT +EIK++++LSAS NKL    E+A
Sbjct: 254 KDELHDFWLQISDQSFDARLQIFFDMADSNEDGKITREEIKELLMLSASANKLAKLKEQA 313

Query: 183 QEHAALIMEELDDENRGYIELSQLETL 263
           +E+A+LIMEELD EN GYIEL QLETL
Sbjct: 314 EEYASLIMEELDPENFGYIELWQLETL 340


>gb|AAC39478.1| respiratory burst oxidase protein E [Arabidopsis thaliana]
          Length = 948

 Score =  114 bits (284), Expect = 1e-23
 Identities = 55/87 (63%), Positives = 70/87 (80%)
 Frame = +3

Query: 3   KTELHDYWCRITDTNFHSRTQIFFDLCDRNMDGKITEKEIKQVILLSASTNKLCITLEEA 182
           K ELHD+W +I+D +F +R QIFFD+ D N DGKIT +EIK++++LSAS NKL    E+A
Sbjct: 254 KDELHDFWLQISDQSFDARLQIFFDMADSNEDGKITREEIKELLMLSASANKLAKLKEQA 313

Query: 183 QEHAALIMEELDDENRGYIELSQLETL 263
           +E+A+LIMEELD EN GYIEL QLETL
Sbjct: 314 EEYASLIMEELDPENFGYIELWQLETL 340


>ref|NP_173357.1| riboflavin synthase-like protein [Arabidopsis thaliana]
           gi|332191699|gb|AEE29820.1| riboflavin synthase-like
           protein [Arabidopsis thaliana]
          Length = 926

 Score =  114 bits (284), Expect = 1e-23
 Identities = 55/87 (63%), Positives = 70/87 (80%)
 Frame = +3

Query: 3   KTELHDYWCRITDTNFHSRTQIFFDLCDRNMDGKITEKEIKQVILLSASTNKLCITLEEA 182
           K ELHD+W +I+D +F +R QIFFD+ D N DGKIT +EIK++++LSAS NKL    E+A
Sbjct: 254 KDELHDFWLQISDQSFDARLQIFFDMADSNEDGKITREEIKELLMLSASANKLAKLKEQA 313

Query: 183 QEHAALIMEELDDENRGYIELSQLETL 263
           +E+A+LIMEELD EN GYIEL QLETL
Sbjct: 314 EEYASLIMEELDPENFGYIELWQLETL 340


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