BLASTX nr result

ID: Coptis23_contig00042416 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00042416
         (303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74230.1| hypothetical protein VITISV_000585 [Vitis vinifera]    99   3e-19
emb|CAN63908.1| hypothetical protein VITISV_044218 [Vitis vinifera]    94   2e-17
emb|CAN60374.1| hypothetical protein VITISV_001215 [Vitis vinifera]    94   2e-17
emb|CAN65808.1| hypothetical protein VITISV_033389 [Vitis vinifera]    93   3e-17
emb|CAN61417.1| hypothetical protein VITISV_009790 [Vitis vinifera]    93   3e-17

>emb|CAN74230.1| hypothetical protein VITISV_000585 [Vitis vinifera]
          Length = 334

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 52/102 (50%), Positives = 71/102 (69%), Gaps = 2/102 (1%)
 Frame = +3

Query: 3   LHHSDNPGITLVSKPLSGDNYPTWNRAMTMALSAKNKIGFVDGSIKEP--TQVASHHWST 176
           LHHSD+PG+ LVSK L GDNY TW+RAM ++LSAK+KIGFV GSIK P  T  +   W  
Sbjct: 23  LHHSDHPGMVLVSKVLEGDNYSTWSRAMRISLSAKDKIGFVTGSIKPPSSTDDSFPSWQR 82

Query: 177 CNGNGVMIWF*HGFLIPLIMILLIVYTDSAAEVWSDLKERFS 302
           CN + V+ W  +   I   +   ++Y ++A+E+W+DL+ERFS
Sbjct: 83  CN-DMVISWLLNS--IHPDIASSVIYAETASEIWADLRERFS 121


>emb|CAN63908.1| hypothetical protein VITISV_044218 [Vitis vinifera]
          Length = 1236

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 48/104 (46%), Positives = 69/104 (66%), Gaps = 4/104 (3%)
 Frame = +3

Query: 3   LHHSDNPGITLVSKPLSGDNYPTWNRAMTMALSAKNKIGFVDGSIKEP--TQVASHH--W 170
           LHHSD+PGI L+SKPL+GDNY TW RAMT++L+AK+K+GF+DG+   P  T     H  W
Sbjct: 20  LHHSDHPGIVLISKPLNGDNYWTWCRAMTISLNAKSKLGFIDGTTTMPSATDKPDEHALW 79

Query: 171 STCNGNGVMIWF*HGFLIPLIMILLIVYTDSAAEVWSDLKERFS 302
             CN + ++ W  +     L     ++++ +A EVW DL++RFS
Sbjct: 80  KKCN-DMILSWILNSLSQDLAD--SVIFSTTAQEVWEDLRDRFS 120


>emb|CAN60374.1| hypothetical protein VITISV_001215 [Vitis vinifera]
          Length = 1535

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 53/103 (51%), Positives = 66/103 (64%), Gaps = 4/103 (3%)
 Frame = +3

Query: 6   HHSDNPGITLVSKPLSGDNYPTWNRAMTMALSAKNKIGFVDGSIKEPTQVASHH----WS 173
           HHSD+PG+ L+SKPL+GDNY  W RAM +AL+AKNK+GFV+G IK P++         WS
Sbjct: 45  HHSDHPGLVLISKPLNGDNYSAWRRAMALALNAKNKLGFVNGIIKAPSEETHPDDYATWS 104

Query: 174 TCNGNGVMIWF*HGFLIPLIMILLIVYTDSAAEVWSDLKERFS 302
            CN + V  W     L P I   +I Y  +A EVW DL ERFS
Sbjct: 105 RCN-DMVHSWI-VNTLNPEISDSVIYYA-TAHEVWEDLCERFS 144


>emb|CAN65808.1| hypothetical protein VITISV_033389 [Vitis vinifera]
          Length = 1279

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 48/104 (46%), Positives = 68/104 (65%), Gaps = 4/104 (3%)
 Frame = +3

Query: 3   LHHSDNPGITLVSKPLSGDNYPTWNRAMTMALSAKNKIGFVDGSIKEP--TQVASHH--W 170
           LHHSD+PG+ LVSKPL+GDNY TW RAMT++L+AK+K+GF+DG+   P  T     H  W
Sbjct: 20  LHHSDHPGMVLVSKPLNGDNYSTWCRAMTISLNAKSKLGFIDGTTTMPSATDKPDEHASW 79

Query: 171 STCNGNGVMIWF*HGFLIPLIMILLIVYTDSAAEVWSDLKERFS 302
             CN + ++ W  +     L     ++++ +A EVW DL +RFS
Sbjct: 80  KKCN-DMILSWILNSLSQDLAD--SVIFSTTAQEVWEDLXDRFS 120


>emb|CAN61417.1| hypothetical protein VITISV_009790 [Vitis vinifera]
          Length = 332

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 47/104 (45%), Positives = 69/104 (66%), Gaps = 4/104 (3%)
 Frame = +3

Query: 3   LHHSDNPGITLVSKPLSGDNYPTWNRAMTMALSAKNKIGFVDG--SIKEPTQVASHH--W 170
           LHHSD+PG+ LVSKPL+GDNY TW RAMT++L+AK+K+GF+DG  ++   T     H  W
Sbjct: 20  LHHSDHPGMVLVSKPLNGDNYSTWCRAMTISLNAKSKLGFIDGTTTMSSATDKPDEHASW 79

Query: 171 STCNGNGVMIWF*HGFLIPLIMILLIVYTDSAAEVWSDLKERFS 302
             CN + ++ W  +     L     ++++ +A EVW DL++RFS
Sbjct: 80  KKCN-DMILSWILNSLSQDLAD--SVIFSTTAQEVWEDLRDRFS 120


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