BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00042375
         (342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW61225.1| hypothetical protein ZEAMMB73_026868 [Zea mays]         65   4e-09
gb|AFW61224.1| BSD domain containing protein [Zea mays]                65   4e-09
gb|ACG24327.1| BSD domain containing protein [Zea mays]                65   4e-09
ref|XP_002443866.1| hypothetical protein SORBIDRAFT_07g003540 [S...    63   3e-08
ref|XP_003556327.1| PREDICTED: probable RNA polymerase II transc...    61   8e-08

>gb|AFW61225.1| hypothetical protein ZEAMMB73_026868 [Zea mays]
          Length = 476

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 37/71 (52%), Positives = 46/71 (64%), Gaps = 5/71 (7%)
 Frame = -2

Query: 296 KYKNSVKDPGVQGVLIMNGDRFMFAPDDPTS-VKLNVGVESIKQHLVSK----KAALLNL 132
           KYK ++KDPG  G+L MNGDRF F P+DP S +K NV   +IK H  +K    KAALLNL
Sbjct: 9   KYKTTIKDPGTPGILRMNGDRFTFTPNDPRSAMKFNVDFRTIKGHKFNKVEGNKAALLNL 68

Query: 131 TLDPAIIPGGY 99
           + +     GGY
Sbjct: 69  SKEDK--AGGY 77


>gb|AFW61224.1| BSD domain containing protein [Zea mays]
          Length = 600

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 37/71 (52%), Positives = 46/71 (64%), Gaps = 5/71 (7%)
 Frame = -2

Query: 296 KYKNSVKDPGVQGVLIMNGDRFMFAPDDPTS-VKLNVGVESIKQHLVSK----KAALLNL 132
           KYK ++KDPG  G+L MNGDRF F P+DP S +K NV   +IK H  +K    KAALLNL
Sbjct: 9   KYKTTIKDPGTPGILRMNGDRFTFTPNDPRSAMKFNVDFRTIKGHKFNKVEGNKAALLNL 68

Query: 131 TLDPAIIPGGY 99
           + +     GGY
Sbjct: 69  SKEDK--AGGY 77


>gb|ACG24327.1| BSD domain containing protein [Zea mays]
          Length = 600

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 37/71 (52%), Positives = 46/71 (64%), Gaps = 5/71 (7%)
 Frame = -2

Query: 296 KYKNSVKDPGVQGVLIMNGDRFMFAPDDPTS-VKLNVGVESIKQHLVSK----KAALLNL 132
           KYK ++KDPG  G+L MNGDRF F P+DP S +K NV   +IK H  +K    KAALLNL
Sbjct: 9   KYKTTIKDPGTPGILRMNGDRFTFTPNDPRSAMKFNVDFRTIKGHKFNKVEGNKAALLNL 68

Query: 131 TLDPAIIPGGY 99
           + +     GGY
Sbjct: 69  SKEDK--AGGY 77


>ref|XP_002443866.1| hypothetical protein SORBIDRAFT_07g003540 [Sorghum bicolor]
           gi|241940216|gb|EES13361.1| hypothetical protein
           SORBIDRAFT_07g003540 [Sorghum bicolor]
          Length = 600

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 36/71 (50%), Positives = 45/71 (63%), Gaps = 5/71 (7%)
 Frame = -2

Query: 296 KYKNSVKDPGVQGVLIMNGDRFMFAPDDPTS-VKLNVGVESIKQHLVSK----KAALLNL 132
           KYK ++KDPG  G+L MN DRF F P+DP S +K NV   +IK H  +K    KAALLNL
Sbjct: 9   KYKTTIKDPGTPGILRMNDDRFTFTPNDPRSAMKFNVDFRTIKGHKFNKVEGNKAALLNL 68

Query: 131 TLDPAIIPGGY 99
           + +     GGY
Sbjct: 69  SKEDK--AGGY 77


>ref|XP_003556327.1| PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1-like [Glycine max]
          Length = 587

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 36/66 (54%), Positives = 43/66 (65%), Gaps = 5/66 (7%)
 Frame = -2

Query: 314 QVVMRVKYKNSVKDPGVQGVLIMNGDRFMFAPDDPTS-VKLNVGVESIKQHLV----SKK 150
           QVV R KYK +VKDPG  GVL +  D+F+F P+DPTS  KL+V    I+ H V    SKK
Sbjct: 5   QVVKRAKYKTTVKDPGTPGVLKLTQDKFVFKPNDPTSKTKLDVEFRFIQGHKVTKEGSKK 64

Query: 149 AALLNL 132
            A LNL
Sbjct: 65  PAWLNL 70