BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00042365
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277549.1| PREDICTED: pentatricopeptide repeat-containi...   152   2e-35
ref|XP_002528283.1| pentatricopeptide repeat-containing protein,...   137   1e-30
ref|XP_004172296.1| PREDICTED: pentatricopeptide repeat-containi...   134   1e-29
ref|XP_004137053.1| PREDICTED: pentatricopeptide repeat-containi...   132   2e-29
emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]   130   1e-28

>ref|XP_002277549.1| PREDICTED: pentatricopeptide repeat-containing protein At2g21090
           [Vitis vinifera]
          Length = 612

 Score =  152 bits (385), Expect = 2e-35
 Identities = 72/100 (72%), Positives = 85/100 (85%)
 Frame = -1

Query: 301 HYACLVDLFGRAGRFDEVKDLLQKMSCKPDGRVWNAVLGACKIHGNTELGRIAAEHLIDL 122
           HYACL+DL GRAG F+EV D L+KM  KPD RVWNA+LG C+IHG+ ELGR AAE LI+L
Sbjct: 464 HYACLIDLLGRAGCFEEVMDQLEKMPYKPDDRVWNALLGVCRIHGHIELGRKAAERLIEL 523

Query: 121 EPQSSAAYVLLSNVYALSGRWKSVEKVRHLMNRRQVKKEQ 2
           EPQSS AYVLLS++YA+ GRW+SV+KVR LMN RQVKKE+
Sbjct: 524 EPQSSTAYVLLSSIYAVLGRWESVQKVRQLMNERQVKKER 563


>ref|XP_002528283.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532320|gb|EEF34121.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 602

 Score =  137 bits (344), Expect = 1e-30
 Identities = 60/100 (60%), Positives = 79/100 (79%)
 Frame = -1

Query: 301 HYACLVDLFGRAGRFDEVKDLLQKMSCKPDGRVWNAVLGACKIHGNTELGRIAAEHLIDL 122
           HYACL+DL GRAG FD + + L+KM CKP+  +WNA+LG C++HGN E GR  AE +I+L
Sbjct: 455 HYACLIDLLGRAGHFDTLMNQLEKMPCKPNDEIWNALLGVCRMHGNIEFGREVAEKIIEL 514

Query: 121 EPQSSAAYVLLSNVYALSGRWKSVEKVRHLMNRRQVKKEQ 2
           +PQSSAAYVLLS+++A  GRW+ VE VR LMN R V+K++
Sbjct: 515 DPQSSAAYVLLSSIHAAVGRWELVENVRQLMNERHVRKDR 554


>ref|XP_004172296.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g21090-like [Cucumis sativus]
          Length = 611

 Score =  134 bits (336), Expect = 1e-29
 Identities = 61/100 (61%), Positives = 81/100 (81%)
 Frame = -1

Query: 301 HYACLVDLFGRAGRFDEVKDLLQKMSCKPDGRVWNAVLGACKIHGNTELGRIAAEHLIDL 122
           HYACL+DL GRAG F E+ + L+ MSCKPD RVW+A+LG C+IH N ELGR  AE +I+L
Sbjct: 467 HYACLIDLLGRAGCFVELVNELENMSCKPDDRVWSALLGVCRIHNNIELGRKVAERVIEL 526

Query: 121 EPQSSAAYVLLSNVYALSGRWKSVEKVRHLMNRRQVKKEQ 2
           +PQSSAAYV L+++YA  G+W+SVEKVR LM+ + ++KE+
Sbjct: 527 KPQSSAAYVSLASLYAFLGKWESVEKVRELMDEKFIRKER 566


>ref|XP_004137053.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g21090-like [Cucumis sativus]
          Length = 611

 Score =  132 bits (333), Expect = 2e-29
 Identities = 60/100 (60%), Positives = 81/100 (81%)
 Frame = -1

Query: 301 HYACLVDLFGRAGRFDEVKDLLQKMSCKPDGRVWNAVLGACKIHGNTELGRIAAEHLIDL 122
           HY+CL+DL GRAG F E+ + L+ MSCKPD RVW+A+LG C+IH N ELGR  AE +I+L
Sbjct: 467 HYSCLIDLLGRAGCFVELVNELENMSCKPDDRVWSALLGVCRIHNNIELGRKVAERVIEL 526

Query: 121 EPQSSAAYVLLSNVYALSGRWKSVEKVRHLMNRRQVKKEQ 2
           +PQSSAAYV L+++YA  G+W+SVEKVR LM+ + ++KE+
Sbjct: 527 KPQSSAAYVSLASLYAFLGKWESVEKVRELMDEKFIRKER 566


>emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]
          Length = 748

 Score =  130 bits (326), Expect = 1e-28
 Identities = 54/100 (54%), Positives = 75/100 (75%)
 Frame = -1

Query: 301 HYACLVDLFGRAGRFDEVKDLLQKMSCKPDGRVWNAVLGACKIHGNTELGRIAAEHLIDL 122
           HY C++DL GRAG FDE + L++ M  KPDG +W ++LGAC++HGN ELG  AA+HL +L
Sbjct: 505 HYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFEL 564

Query: 121 EPQSSAAYVLLSNVYALSGRWKSVEKVRHLMNRRQVKKEQ 2
           EP++  AYVLLSN+YA +GRW  V ++R  +N + +KK Q
Sbjct: 565 EPENPGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKKXQ 604