BLASTX nr result

ID: Coptis23_contig00042359 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00042359
         (257 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327114.1| predicted protein [Populus trichocarpa] gi|2...   134   1e-29
ref|XP_002313841.1| predicted protein [Populus trichocarpa] gi|2...   132   4e-29
ref|XP_002330322.1| predicted protein [Populus trichocarpa] gi|2...   130   9e-29
ref|XP_003518849.1| PREDICTED: nodulation protein H-like [Glycin...   130   1e-28
gb|AFK36381.1| unknown [Lotus japonicus]                              129   3e-28

>ref|XP_002327114.1| predicted protein [Populus trichocarpa] gi|222835429|gb|EEE73864.1|
           predicted protein [Populus trichocarpa]
          Length = 344

 Score =  134 bits (336), Expect = 1e-29
 Identities = 59/85 (69%), Positives = 70/85 (82%)
 Frame = +3

Query: 3   SICLKQISAFRKPKLIDIQAIHQPCYASGLEQWEIPYVHFPKPYTYSRNECACNPVRYFA 182
           SIC+KQIS     K ++I+   QPC +S +E+WE PYVH+PKP T+SR ECACNPVR+FA
Sbjct: 42  SICIKQISPHTTAKFLNIRIFDQPCNSSNVEEWEKPYVHYPKPETFSREECACNPVRFFA 101

Query: 183 ILSMQRSGSGWFETLLNSHINISSN 257
           I SMQRSGSGWFETLLNSHIN+SSN
Sbjct: 102 IFSMQRSGSGWFETLLNSHINVSSN 126


>ref|XP_002313841.1| predicted protein [Populus trichocarpa] gi|222850249|gb|EEE87796.1|
           predicted protein [Populus trichocarpa]
          Length = 345

 Score =  132 bits (331), Expect = 4e-29
 Identities = 59/85 (69%), Positives = 67/85 (78%)
 Frame = +3

Query: 3   SICLKQISAFRKPKLIDIQAIHQPCYASGLEQWEIPYVHFPKPYTYSRNECACNPVRYFA 182
           SICLKQI     P  ++++ I +PC    +E WEIPYVH+PKP TYSR EC CNPVRYFA
Sbjct: 43  SICLKQIGIRTNPGFLNVEVIERPCPEPNIEPWEIPYVHYPKPITYSRVECKCNPVRYFA 102

Query: 183 ILSMQRSGSGWFETLLNSHINISSN 257
           ILSMQRSGSGWFETLLN+H NISSN
Sbjct: 103 ILSMQRSGSGWFETLLNNHTNISSN 127


>ref|XP_002330322.1| predicted protein [Populus trichocarpa] gi|222871357|gb|EEF08488.1|
           predicted protein [Populus trichocarpa]
          Length = 333

 Score =  130 bits (328), Expect = 9e-29
 Identities = 58/85 (68%), Positives = 67/85 (78%)
 Frame = +3

Query: 3   SICLKQISAFRKPKLIDIQAIHQPCYASGLEQWEIPYVHFPKPYTYSRNECACNPVRYFA 182
           SICLKQI     P  ++++ I +PC    +E WEIPYVH+P+P TYSR EC CNPVRYFA
Sbjct: 33  SICLKQIGIRTNPGFLNVEVIERPCPEPNIEPWEIPYVHYPRPKTYSRAECKCNPVRYFA 92

Query: 183 ILSMQRSGSGWFETLLNSHINISSN 257
           ILSMQRSGSGWFETLLN+H NISSN
Sbjct: 93  ILSMQRSGSGWFETLLNNHTNISSN 117


>ref|XP_003518849.1| PREDICTED: nodulation protein H-like [Glycine max]
          Length = 344

 Score =  130 bits (326), Expect = 1e-28
 Identities = 59/85 (69%), Positives = 66/85 (77%)
 Frame = +3

Query: 3   SICLKQISAFRKPKLIDIQAIHQPCYASGLEQWEIPYVHFPKPYTYSRNECACNPVRYFA 182
           SICLKQI    K   +DI+ + +PC    +E WEIPYVH+P P TYSR ECAC+PVRYFA
Sbjct: 42  SICLKQIGTSSKIGFLDIKVVQKPCPEPNIEPWEIPYVHYPNPKTYSRAECACHPVRYFA 101

Query: 183 ILSMQRSGSGWFETLLNSHINISSN 257
           ILSMQRSGSGWFET LNSH NISSN
Sbjct: 102 ILSMQRSGSGWFETFLNSHANISSN 126


>gb|AFK36381.1| unknown [Lotus japonicus]
          Length = 251

 Score =  129 bits (324), Expect = 3e-28
 Identities = 59/85 (69%), Positives = 66/85 (77%)
 Frame = +3

Query: 3   SICLKQISAFRKPKLIDIQAIHQPCYASGLEQWEIPYVHFPKPYTYSRNECACNPVRYFA 182
           +ICLKQI    K  L+DI+ I  PC    +E WEIPYVH+P P TYSR EC+C+PVRYFA
Sbjct: 42  TICLKQIGTSSKIGLLDIKVIQNPCPEPNIEPWEIPYVHYPNPKTYSREECSCHPVRYFA 101

Query: 183 ILSMQRSGSGWFETLLNSHINISSN 257
           ILSMQRSGSGWFET LNSH NISSN
Sbjct: 102 ILSMQRSGSGWFETFLNSHPNISSN 126


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