BLASTX nr result

ID: Coptis23_contig00042352 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00042352
         (293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|2...    68   7e-10
ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09
ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09
ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09

>ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|222870351|gb|EEF07482.1|
            predicted protein [Populus trichocarpa]
          Length = 1046

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 36/93 (38%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
 Frame = +3

Query: 3    AKVSNLIHNGEWQVPRTLRMHMPEIIQQAEDEVEI-FGGSDKVIWSASLHGEFQLKETYH 179
            AKV+ LI N EW+ P T  +    II+          G  D++IW  S +  F +K  + 
Sbjct: 805  AKVNVLIQNSEWKTPTTQAIGWHPIIEAIPSNSNPKMGQKDEIIWLDSPNHRFSVKVAWE 864

Query: 180  NLKRKRQSVTWWSLVWFANKIPRHSFTS*MLFQ 278
             L+R RQ V W  +VWF N +PRHSF   M+ Q
Sbjct: 865  QLRRHRQLVEWHDIVWFKNAVPRHSFLLWMVVQ 897


>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
            predicted protein [Populus trichocarpa]
          Length = 1386

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 35/93 (37%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
 Frame = +3

Query: 3    AKVSNLIHNGEWQVPRTLRMHMPEIIQQAEDEVEI-FGGSDKVIWSASLHGEFQLKETYH 179
            AKV+ LI N EW+ P T  +    II+          G  D+++W  S +  F +K  + 
Sbjct: 1145 AKVNVLIQNSEWKTPTTQAIGWHPIIEAIPSNSNPKMGQKDEIVWLDSPNHRFLVKVAWE 1204

Query: 180  NLKRKRQSVTWWSLVWFANKIPRHSFTS*MLFQ 278
            +L+R RQ V W  +VWF N +PRHSF   M  Q
Sbjct: 1205 HLRRHRQMVEWHDIVWFKNAVPRHSFLLWMAVQ 1237


>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 35/93 (37%), Positives = 48/93 (51%), Gaps = 1/93 (1%)
 Frame = +3

Query: 3   AKVSNLIHNGEWQVPRTLRMHMPEIIQQAEDEVEI-FGGSDKVIWSASLHGEFQLKETYH 179
           AKV+ LI N EW+ P T  +    II+          G  D+++W  S +  F +K  + 
Sbjct: 272 AKVNVLIQNSEWKTPTTQAIGWHPIIEAIPSNSNPKMGQKDELVWLDSPNHRFSVKVAWE 331

Query: 180 NLKRKRQSVTWWSLVWFANKIPRHSFTS*MLFQ 278
            L+R RQ V W  +VWF N +PRHSF   M  Q
Sbjct: 332 QLRRHRQMVEWHDIVWFKNAVPRHSFLLWMAVQ 364


>ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|222849970|gb|EEE87517.1|
           predicted protein [Populus trichocarpa]
          Length = 331

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 1/93 (1%)
 Frame = +3

Query: 3   AKVSNLIHNGEWQVPRTLRMHMPEIIQQAEDEVEI-FGGSDKVIWSASLHGEFQLKETYH 179
           AKV+ LI N EW+ P T  +    II+          G  D+++W  S +  F +K  + 
Sbjct: 90  AKVNVLIQNSEWKTPTTQAIGWHPIIEAIPSNSNPKMGQKDEIVWLDSPNHRFSVKVAWE 149

Query: 180 NLKRKRQSVTWWSLVWFANKIPRHSFTS*MLFQ 278
            L+R R  V W  +VWF N +PRHSF   M+ Q
Sbjct: 150 QLRRHRHMVEWHDIVWFKNAVPRHSFLLWMVVQ 182


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