BLASTX nr result

ID: Coptis23_contig00042349 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00042349
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327772.1| predicted protein [Populus trichocarpa] gi|2...   131   6e-29
ref|XP_002310286.1| predicted protein [Populus trichocarpa] gi|2...   129   2e-28
emb|CBI17418.3| unnamed protein product [Vitis vinifera]              127   7e-28
ref|XP_002267269.1| PREDICTED: probable leucine-rich repeat rece...   127   7e-28
ref|XP_002533301.1| serine-threonine protein kinase, plant-type,...   125   3e-27

>ref|XP_002327772.1| predicted protein [Populus trichocarpa] gi|222836857|gb|EEE75250.1|
           predicted protein [Populus trichocarpa]
          Length = 641

 Score =  131 bits (329), Expect = 6e-29
 Identities = 65/90 (72%), Positives = 73/90 (81%)
 Frame = -3

Query: 273 NNEFTGKIPSSIGNLRNLLTLDLSRNYLSGPIPPQLAKLKQLQTLDLSYNPLGLVQIPDW 94
           NN FTGKIPSS  NL NL TLDLSRN LSG +PPQLAKLK LQ LDLSYNPLGLV+IPDW
Sbjct: 334 NNYFTGKIPSSFVNLLNLQTLDLSRNRLSGQLPPQLAKLKSLQALDLSYNPLGLVRIPDW 393

Query: 93  LGKMNLFRLLLAKTGIRGQLPVWLSSMPTS 4
             ++ +F+L+LAKTGI G+LP WLSS   S
Sbjct: 394 FQELRVFQLMLAKTGIEGELPHWLSSSSIS 423


>ref|XP_002310286.1| predicted protein [Populus trichocarpa] gi|222853189|gb|EEE90736.1|
           predicted protein [Populus trichocarpa]
          Length = 640

 Score =  129 bits (324), Expect = 2e-28
 Identities = 64/90 (71%), Positives = 73/90 (81%)
 Frame = -3

Query: 273 NNEFTGKIPSSIGNLRNLLTLDLSRNYLSGPIPPQLAKLKQLQTLDLSYNPLGLVQIPDW 94
           NN FTGKIPSS GNL NL TLDLSRN LSG +PPQLAKLK LQTL LSYNPLGLV+IP+W
Sbjct: 333 NNYFTGKIPSSFGNLLNLQTLDLSRNRLSGQLPPQLAKLKSLQTLYLSYNPLGLVRIPNW 392

Query: 93  LGKMNLFRLLLAKTGIRGQLPVWLSSMPTS 4
             ++ +F+L+LA TGI G+LP WLSS   S
Sbjct: 393 FQELRVFQLMLANTGIEGELPHWLSSSSIS 422


>emb|CBI17418.3| unnamed protein product [Vitis vinifera]
          Length = 578

 Score =  127 bits (320), Expect = 7e-28
 Identities = 61/88 (69%), Positives = 72/88 (81%)
 Frame = -3

Query: 273 NNEFTGKIPSSIGNLRNLLTLDLSRNYLSGPIPPQLAKLKQLQTLDLSYNPLGLVQIPDW 94
           NN F+GKIPSSIGN++NL TLDLS+N LSG IP Q+A L+QLQ LDLS+NPL L  IP W
Sbjct: 271 NNYFSGKIPSSIGNIQNLQTLDLSKNLLSGEIPRQIANLRQLQALDLSFNPLELESIPTW 330

Query: 93  LGKMNLFRLLLAKTGIRGQLPVWLSSMP 10
             KMNLF+L+LAKTGI G+LP WL+S P
Sbjct: 331 FAKMNLFKLMLAKTGIAGELPSWLASSP 358



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 37/87 (42%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
 Frame = -3

Query: 270 NEFTGKIPSSIGNLRNLLTLDLSRNYLSGPIPPQLAKLKQLQTLDLSYNPLGLVQIPDWL 91
           N+F+G +PSSIG L  L  LD+  N +SG IPP + KLK L+ LDLS N +    +P  L
Sbjct: 146 NQFSGSVPSSIGKLVLLTKLDVHGNRISGSIPPGIGKLKSLKYLDLSENGI-TGSLPSSL 204

Query: 90  GKMN-LFRLLLAKTGIRGQLPVWLSSM 13
           G ++ L  L L    I G +P  +S +
Sbjct: 205 GGLSELVLLYLNHNQITGSIPSSISGL 231


>ref|XP_002267269.1| PREDICTED: probable leucine-rich repeat receptor-like protein
           kinase At1g35710-like [Vitis vinifera]
          Length = 643

 Score =  127 bits (320), Expect = 7e-28
 Identities = 61/88 (69%), Positives = 72/88 (81%)
 Frame = -3

Query: 273 NNEFTGKIPSSIGNLRNLLTLDLSRNYLSGPIPPQLAKLKQLQTLDLSYNPLGLVQIPDW 94
           NN F+GKIPSSIGN++NL TLDLS+N LSG IP Q+A L+QLQ LDLS+NPL L  IP W
Sbjct: 336 NNYFSGKIPSSIGNIQNLQTLDLSKNLLSGEIPRQIANLRQLQALDLSFNPLELESIPTW 395

Query: 93  LGKMNLFRLLLAKTGIRGQLPVWLSSMP 10
             KMNLF+L+LAKTGI G+LP WL+S P
Sbjct: 396 FAKMNLFKLMLAKTGIAGELPSWLASSP 423



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 37/87 (42%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
 Frame = -3

Query: 270 NEFTGKIPSSIGNLRNLLTLDLSRNYLSGPIPPQLAKLKQLQTLDLSYNPLGLVQIPDWL 91
           N+F+G +PSSIG L  L  LD+  N +SG IPP + KLK L+ LDLS N +    +P  L
Sbjct: 193 NQFSGSVPSSIGKLVLLTKLDVHGNRISGSIPPGIGKLKSLKYLDLSENGI-TGSLPSSL 251

Query: 90  GKMN-LFRLLLAKTGIRGQLPVWLSSM 13
           G ++ L  L L    I G +P  +S +
Sbjct: 252 GGLSELVLLYLNHNQITGSIPSSISGL 278


>ref|XP_002533301.1| serine-threonine protein kinase, plant-type, putative [Ricinus
           communis] gi|223526866|gb|EEF29078.1| serine-threonine
           protein kinase, plant-type, putative [Ricinus communis]
          Length = 637

 Score =  125 bits (315), Expect = 3e-27
 Identities = 62/90 (68%), Positives = 73/90 (81%)
 Frame = -3

Query: 273 NNEFTGKIPSSIGNLRNLLTLDLSRNYLSGPIPPQLAKLKQLQTLDLSYNPLGLVQIPDW 94
           NN FTGKIPSS+GNL NL TLDLSRN LSG  P QLAKL++LQ L+LS+N +GLV++P W
Sbjct: 330 NNSFTGKIPSSLGNLHNLQTLDLSRNQLSGKPPSQLAKLQRLQDLNLSFNHMGLVKLPSW 389

Query: 93  LGKMNLFRLLLAKTGIRGQLPVWLSSMPTS 4
           L K+ LFRL+LAKTGI GQLP WL+S   S
Sbjct: 390 LKKLKLFRLMLAKTGIEGQLPRWLASSSIS 419


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