BLASTX nr result

ID: Coptis23_contig00042347 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00042347
         (343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulga...    54   4e-13
emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulga...    52   5e-13
gb|EEE69144.1| hypothetical protein OsJ_28268 [Oryza sativa Japo...    53   6e-13
gb|EAZ07996.1| hypothetical protein OsI_30258 [Oryza sativa Indi...    53   6e-13
emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulga...    50   8e-13

>emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score = 53.9 bits (128), Expect(2) = 4e-13
 Identities = 23/39 (58%), Positives = 30/39 (76%)
 Frame = +3

Query: 222 LNHSNIVFIPKNKNPTLPEHFRPISLPNVSYKIIAKIIV 338
           +NH+NI  IPK KNPT P  FRPI+L NV YK+++K +V
Sbjct: 488 INHTNIALIPKVKNPTTPAEFRPIALCNVVYKLVSKALV 526



 Score = 45.1 bits (105), Expect(2) = 4e-13
 Identities = 20/50 (40%), Positives = 28/50 (56%)
 Frame = +2

Query: 17  LINADDNAQLVHSVSDGEILKVLKDIGPLKASGPDGFHAIFYKTFWAEVG 166
           ++  + N  L+   S  E+   L  + P KA GPDG HAIFY+ FW  +G
Sbjct: 419 VVTEECNTWLLKPFSKEELYVALSQMHPCKAPGPDGMHAIFYQKFWHIIG 468


>emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score = 51.6 bits (122), Expect(2) = 5e-13
 Identities = 24/54 (44%), Positives = 32/54 (59%)
 Frame = +2

Query: 5   VIPNLINADDNAQLVHSVSDGEILKVLKDIGPLKASGPDGFHAIFYKTFWAEVG 166
           VI  ++  + N +L+   S  EIL  L+ + P KA GPDG H IFY+ FW  VG
Sbjct: 415 VIEPVVTEEHNLKLLEPFSKDEILAALQQMHPCKAPGPDGMHVIFYQRFWHIVG 468



 Score = 47.4 bits (111), Expect(2) = 5e-13
 Identities = 22/39 (56%), Positives = 29/39 (74%)
 Frame = +3

Query: 222 LNHSNIVFIPKNKNPTLPEHFRPISLPNVSYKIIAKIIV 338
           +N++NI  IPK KNPT    FRPI+L NV YK+++K IV
Sbjct: 488 VNNTNIALIPKVKNPTKAAEFRPIALCNVLYKLMSKAIV 526


>gb|EEE69144.1| hypothetical protein OsJ_28268 [Oryza sativa Japonica Group]
          Length = 1256

 Score = 52.8 bits (125), Expect(2) = 6e-13
 Identities = 28/65 (43%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
 Frame = +3

Query: 156 RKW----DQRLELVKDFFQYGTFSKELNHSNIVFIPKNKNPTLPEHFRPISLPNVSYKII 323
           R W    D  +  V++FF  GT    +N + IV IPK + P   + FRPISL NV YKI+
Sbjct: 537 RNWAILKDDIVRAVQEFFSSGTMPSGVNETAIVLIPKTEQPQELKDFRPISLCNVVYKIV 596

Query: 324 AKIIV 338
           +K +V
Sbjct: 597 SKCLV 601



 Score = 45.8 bits (107), Expect(2) = 6e-13
 Identities = 22/41 (53%), Positives = 26/41 (63%)
 Frame = +2

Query: 35  NAQLVHSVSDGEILKVLKDIGPLKASGPDGFHAIFYKTFWA 157
           N +L  +VS+ EI   L  IGPLKA GPDGF   FY+  WA
Sbjct: 500 NEELCKTVSEEEIANALFQIGPLKAPGPDGFPGRFYQRNWA 540


>gb|EAZ07996.1| hypothetical protein OsI_30258 [Oryza sativa Indica Group]
          Length = 633

 Score = 52.8 bits (125), Expect(2) = 6e-13
 Identities = 28/65 (43%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
 Frame = +3

Query: 156 RKW----DQRLELVKDFFQYGTFSKELNHSNIVFIPKNKNPTLPEHFRPISLPNVSYKII 323
           R W    D  +  V++FF  GT    +N + IV IPK + P   + FRPISL NV YKI+
Sbjct: 537 RNWAILKDDIVRAVQEFFSSGTMPSGVNETAIVLIPKTEQPQELKDFRPISLCNVVYKIV 596

Query: 324 AKIIV 338
           +K +V
Sbjct: 597 SKCLV 601



 Score = 45.8 bits (107), Expect(2) = 6e-13
 Identities = 22/41 (53%), Positives = 26/41 (63%)
 Frame = +2

Query: 35  NAQLVHSVSDGEILKVLKDIGPLKASGPDGFHAIFYKTFWA 157
           N +L  +VS+ EI   L  IGPLKA GPDGF   FY+  WA
Sbjct: 500 NEELCKTVSEEEIANALFQIGPLKAPGPDGFPGRFYQRNWA 540


>emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1378

 Score = 49.7 bits (117), Expect(2) = 8e-13
 Identities = 22/50 (44%), Positives = 31/50 (62%)
 Frame = +2

Query: 20  INADDNAQLVHSVSDGEILKVLKDIGPLKASGPDGFHAIFYKTFWAEVGP 169
           I ADD  +++  +S+ E+   LK + P KA GPDGF  +FY+ FW  V P
Sbjct: 423 ITADDFEKMMRPLSEVEVTLALKSMKPFKAPGPDGFQPLFYQRFWDLVKP 472



 Score = 48.5 bits (114), Expect(2) = 8e-13
 Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
 Frame = +3

Query: 156 RKWD----QRLELVKDFFQYGTFSKELNHSNIVFIPKNKNPTLPEHFRPISLPNVSYKII 323
           R WD      + LV +      F +  N + IV IPK   P L +HFRPI L N+ YKI+
Sbjct: 465 RFWDLVKPNVMHLVSEILSGRDFPEGFNDTFIVLIPKMDIPQLAKHFRPIGLCNIVYKIV 524

Query: 324 AKIIV 338
            K+I+
Sbjct: 525 TKVII 529


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