BLASTX nr result
ID: Coptis23_contig00042342
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00042342 (264 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002318327.1| predicted protein [Populus trichocarpa] gi|2... 106 2e-21 ref|XP_002270937.1| PREDICTED: glutamate decarboxylase 1 [Vitis ... 104 9e-21 ref|NP_001233822.1| glutamate decarboxylase isoform2 [Solanum ly... 103 2e-20 ref|XP_004165664.1| PREDICTED: glutamate decarboxylase-like [Cuc... 100 9e-20 ref|XP_004137382.1| PREDICTED: glutamate decarboxylase-like [Cuc... 100 9e-20 >ref|XP_002318327.1| predicted protein [Populus trichocarpa] gi|222859000|gb|EEE96547.1| predicted protein [Populus trichocarpa] Length = 501 Score = 106 bits (264), Expect = 2e-21 Identities = 51/86 (59%), Positives = 59/86 (68%) Frame = -3 Query: 262 GYKNVMHNCMENARQLREGLEKTGHFEIVSKVKGIPXXXXXXXXXXXXXXXXXXXXLRHY 83 GYK +M NC+ENAR LREGLEKTG F+IVSK KG+P LR + Sbjct: 339 GYKRIMENCLENARVLREGLEKTGRFDIVSKDKGVPLVAFSLKDSSKHTVFEIAESLRRF 398 Query: 82 GWIVPAYTMPANAQHVIILRVVVRED 5 GWI+PAYTMPANAQH+ +LRVVVRED Sbjct: 399 GWIIPAYTMPANAQHIAVLRVVVRED 424 >ref|XP_002270937.1| PREDICTED: glutamate decarboxylase 1 [Vitis vinifera] gi|297738155|emb|CBI27356.3| unnamed protein product [Vitis vinifera] Length = 488 Score = 104 bits (259), Expect = 9e-21 Identities = 50/86 (58%), Positives = 57/86 (66%) Frame = -3 Query: 262 GYKNVMHNCMENARQLREGLEKTGHFEIVSKVKGIPXXXXXXXXXXXXXXXXXXXXLRHY 83 GY+N+M NC ENAR L+EGLEKTGHF IVSK G+P LR Y Sbjct: 339 GYRNIMENCQENARVLKEGLEKTGHFNIVSKENGVPLVAFSLKDNSCHNEFEVSDMLRRY 398 Query: 82 GWIVPAYTMPANAQHVIILRVVVRED 5 GWIVPAYTMP +AQHV +LRVV+RED Sbjct: 399 GWIVPAYTMPPDAQHVTVLRVVIRED 424 >ref|NP_001233822.1| glutamate decarboxylase isoform2 [Solanum lycopersicum] gi|171854579|dbj|BAG16480.1| glutamate decarboxylase isoform2 [Solanum lycopersicum] Length = 503 Score = 103 bits (256), Expect = 2e-20 Identities = 51/86 (59%), Positives = 57/86 (66%) Frame = -3 Query: 262 GYKNVMHNCMENARQLREGLEKTGHFEIVSKVKGIPXXXXXXXXXXXXXXXXXXXXLRHY 83 GYKNVM NC ENAR LREGLEKTG FEIVSK G+P LR + Sbjct: 339 GYKNVMENCQENARVLREGLEKTGRFEIVSKEVGVPLVAFSLKDNSKHDEFEISETLRRF 398 Query: 82 GWIVPAYTMPANAQHVIILRVVVRED 5 GWIVPAYTMP +AQH+ +LRVV+RED Sbjct: 399 GWIVPAYTMPPDAQHITVLRVVIRED 424 >ref|XP_004165664.1| PREDICTED: glutamate decarboxylase-like [Cucumis sativus] Length = 496 Score = 100 bits (250), Expect = 9e-20 Identities = 49/86 (56%), Positives = 57/86 (66%) Frame = -3 Query: 262 GYKNVMHNCMENARQLREGLEKTGHFEIVSKVKGIPXXXXXXXXXXXXXXXXXXXXLRHY 83 GYKNVM NC ENAR LREG+EK G FE+VSK G+P LR + Sbjct: 338 GYKNVMENCRENARVLREGIEKMGRFEVVSKDVGVPLVAFTLKDSSKHTVFEISENLRRF 397 Query: 82 GWIVPAYTMPANAQHVIILRVVVRED 5 GWIVPAYTMPA+AQH+ +LRVV+RED Sbjct: 398 GWIVPAYTMPADAQHIAVLRVVIRED 423 >ref|XP_004137382.1| PREDICTED: glutamate decarboxylase-like [Cucumis sativus] Length = 496 Score = 100 bits (250), Expect = 9e-20 Identities = 49/86 (56%), Positives = 57/86 (66%) Frame = -3 Query: 262 GYKNVMHNCMENARQLREGLEKTGHFEIVSKVKGIPXXXXXXXXXXXXXXXXXXXXLRHY 83 GYKNVM NC ENAR LREG+EK G FE+VSK G+P LR + Sbjct: 338 GYKNVMENCRENARVLREGIEKMGRFEVVSKDVGVPLVAFTLKDSSKHTVFEISENLRRF 397 Query: 82 GWIVPAYTMPANAQHVIILRVVVRED 5 GWIVPAYTMPA+AQH+ +LRVV+RED Sbjct: 398 GWIVPAYTMPADAQHIAVLRVVIRED 423