BLASTX nr result

ID: Coptis23_contig00042333 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00042333
         (335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_200556.1| AAA-type ATPase family protein [Arabidopsis tha...   182   3e-44
ref|XP_003541777.1| PREDICTED: probable mitochondrial chaperone ...   179   2e-43
ref|XP_003549478.1| PREDICTED: probable mitochondrial chaperone ...   178   5e-43
ref|XP_002269013.2| PREDICTED: probable mitochondrial chaperone ...   174   7e-42
emb|CAN62143.1| hypothetical protein VITISV_023956 [Vitis vinifera]   174   7e-42

>ref|NP_200556.1| AAA-type ATPase family protein [Arabidopsis thaliana]
           gi|9758309|dbj|BAB08783.1| unnamed protein product
           [Arabidopsis thaliana] gi|332009523|gb|AED96906.1|
           AAA-type ATPase family protein [Arabidopsis thaliana]
          Length = 520

 Score =  182 bits (461), Expect = 3e-44
 Identities = 85/111 (76%), Positives = 98/111 (88%)
 Frame = -1

Query: 335 WTSIASLLGVFAFCQSLLHAVFPPELRYASVKFLNRIFHWFSSYCYFDITEIDGVNTNEL 156
           WTS+ASLLGV AFCQSL+ ++FPPELR+A +KF NRIFH FSSYCYFDITEIDGVNTNEL
Sbjct: 5   WTSLASLLGVLAFCQSLMQSIFPPELRFAFLKFFNRIFHVFSSYCYFDITEIDGVNTNEL 64

Query: 155 YNAVQLYLSSYASNTGSRVSLTRALNSSSITYGLSKNDTLVDTFNGIVACW 3
           YNAVQLYLSS  S  G+R+SLTRA+NSSSIT+GLS ND++VDTFNG+   W
Sbjct: 65  YNAVQLYLSSSVSIAGNRLSLTRAVNSSSITFGLSNNDSIVDTFNGVTVLW 115


>ref|XP_003541777.1| PREDICTED: probable mitochondrial chaperone BCS1-B-like [Glycine
           max]
          Length = 513

 Score =  179 bits (455), Expect = 2e-43
 Identities = 85/111 (76%), Positives = 97/111 (87%)
 Frame = -1

Query: 335 WTSIASLLGVFAFCQSLLHAVFPPELRYASVKFLNRIFHWFSSYCYFDITEIDGVNTNEL 156
           WTS+ASLLGVFAFCQ++L AVFPPELR+ASVK   RIFH FSSYCYFDITEIDGVNTNEL
Sbjct: 5   WTSLASLLGVFAFCQTILQAVFPPELRFASVKLFYRIFHCFSSYCYFDITEIDGVNTNEL 64

Query: 155 YNAVQLYLSSYASNTGSRVSLTRALNSSSITYGLSKNDTLVDTFNGIVACW 3
           YNAVQLYLSS  S TG+R+SLTRA+NSS  T+GL+ ND++VDTFNG+   W
Sbjct: 65  YNAVQLYLSSSVSITGNRLSLTRAVNSSGFTFGLANNDSIVDTFNGVNVLW 115


>ref|XP_003549478.1| PREDICTED: probable mitochondrial chaperone BCS1-B-like [Glycine
           max]
          Length = 512

 Score =  178 bits (451), Expect = 5e-43
 Identities = 82/111 (73%), Positives = 98/111 (88%)
 Frame = -1

Query: 335 WTSIASLLGVFAFCQSLLHAVFPPELRYASVKFLNRIFHWFSSYCYFDITEIDGVNTNEL 156
           WTS+AS+LGVFAFCQ++L AVFPPELR+ASVK  +R+FH FS+YCYFDITEIDGVNTNEL
Sbjct: 5   WTSLASVLGVFAFCQTILQAVFPPELRFASVKLFHRVFHCFSTYCYFDITEIDGVNTNEL 64

Query: 155 YNAVQLYLSSYASNTGSRVSLTRALNSSSITYGLSKNDTLVDTFNGIVACW 3
           YNAVQLYLSS  S TG+R+SLTRA+NSS  T+GL+ ND++VDTFNG+   W
Sbjct: 65  YNAVQLYLSSSVSITGNRLSLTRAVNSSGFTFGLANNDSIVDTFNGVNVLW 115


>ref|XP_002269013.2| PREDICTED: probable mitochondrial chaperone BCS1-B-like [Vitis
           vinifera] gi|297735391|emb|CBI17831.3| unnamed protein
           product [Vitis vinifera]
          Length = 514

 Score =  174 bits (441), Expect = 7e-42
 Identities = 86/111 (77%), Positives = 97/111 (87%)
 Frame = -1

Query: 335 WTSIASLLGVFAFCQSLLHAVFPPELRYASVKFLNRIFHWFSSYCYFDITEIDGVNTNEL 156
           W+S+ASLLGV AFCQS+LHAVFPPELR+A +K   R+F+  SSYCYFDITEIDGVNTNEL
Sbjct: 5   WSSLASLLGVLAFCQSILHAVFPPELRFAVLKLFKRLFNC-SSYCYFDITEIDGVNTNEL 63

Query: 155 YNAVQLYLSSYASNTGSRVSLTRALNSSSITYGLSKNDTLVDTFNGIVACW 3
           YNAVQLYLSS AS TGSR+SLTRALNSSS T+GLS ND+LVDTFNG+   W
Sbjct: 64  YNAVQLYLSSSASITGSRLSLTRALNSSSTTFGLSNNDSLVDTFNGVSVLW 114


>emb|CAN62143.1| hypothetical protein VITISV_023956 [Vitis vinifera]
          Length = 501

 Score =  174 bits (441), Expect = 7e-42
 Identities = 86/111 (77%), Positives = 97/111 (87%)
 Frame = -1

Query: 335 WTSIASLLGVFAFCQSLLHAVFPPELRYASVKFLNRIFHWFSSYCYFDITEIDGVNTNEL 156
           W+S+ASLLGV AFCQS+LHAVFPPELR+A +K   R+F+  SSYCYFDITEIDGVNTNEL
Sbjct: 5   WSSLASLLGVLAFCQSILHAVFPPELRFAVLKLFKRLFNC-SSYCYFDITEIDGVNTNEL 63

Query: 155 YNAVQLYLSSYASNTGSRVSLTRALNSSSITYGLSKNDTLVDTFNGIVACW 3
           YNAVQLYLSS AS TGSR+SLTRALNSSS T+GLS ND+LVDTFNG+   W
Sbjct: 64  YNAVQLYLSSSASITGSRLSLTRALNSSSTTFGLSNNDSLVDTFNGVSVLW 114


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