BLASTX nr result

ID: Coptis23_contig00042327 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00042327
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67292.1| hypothetical protein VITISV_040598 [Vitis vinifera]    94   1e-17
emb|CBI25767.3| unnamed protein product [Vitis vinifera]               87   1e-15
ref|XP_002532354.1| conserved hypothetical protein [Ricinus comm...    83   2e-14
ref|XP_002303367.1| predicted protein [Populus trichocarpa] gi|2...    76   2e-12
ref|XP_003611360.1| hypothetical protein MTR_5g013140 [Medicago ...    72   4e-11

>emb|CAN67292.1| hypothetical protein VITISV_040598 [Vitis vinifera]
          Length = 352

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 51/103 (49%), Positives = 66/103 (64%), Gaps = 2/103 (1%)
 Frame = -1

Query: 332 ESAANGFISMKKNKSTHKNDMNCSNNSQDNNVQYVKKMKLKSPLNEGQGGLG--RKPLYE 159
           E A NGF+S +KN+   +ND N  N  Q+   Q V        L+ G+  +G  RK L E
Sbjct: 253 ELAENGFVSTRKNRCRGENDHNHLNKPQE--FQLVXSRNTGMVLSTGEKNVGERRKVLSE 310

Query: 158 KTNLHYEVAMPETSGKWQCPQKSKPDLGPPMKQLGLERWVHRV 30
           KTNL +   + E +GKW+CPQKSKPDLGPP+KQL LE+WVHR+
Sbjct: 311 KTNLQHS-DVTEIAGKWKCPQKSKPDLGPPLKQLRLEQWVHRL 352


>emb|CBI25767.3| unnamed protein product [Vitis vinifera]
          Length = 644

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 48/99 (48%), Positives = 62/99 (62%), Gaps = 2/99 (2%)
 Frame = -1

Query: 332 ESAANGFISMKKNKSTHKNDMNCSNNSQDNNVQYVKKMKLKSPLNEGQGGLG--RKPLYE 159
           E A NGF+S +KN+   +ND N  N  Q+   Q V        L+ G+  +G  RK L E
Sbjct: 238 ELAENGFVSTRKNRCRGENDHNHLNKPQE--FQLVSSRNTGMVLSTGEKNVGERRKVLSE 295

Query: 158 KTNLHYEVAMPETSGKWQCPQKSKPDLGPPMKQLGLERW 42
           KTNL +   + E +GKW+CPQKSKPDLGPP+KQL LE+W
Sbjct: 296 KTNLQHS-DVTEIAGKWKCPQKSKPDLGPPLKQLRLEQW 333


>ref|XP_002532354.1| conserved hypothetical protein [Ricinus communis]
           gi|223527941|gb|EEF30027.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 534

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 45/103 (43%), Positives = 63/103 (61%), Gaps = 1/103 (0%)
 Frame = -1

Query: 338 VNESAANGFISMKKNKSTHKNDMNCSNNSQDNNVQYVKKMKLKSPLNEGQGGLGRKPLYE 159
           V +   NGF++ KK++    ND N     Q    +  +K +  S  ++G   + RK L+E
Sbjct: 434 VRKKVENGFVTTKKHR-VRPNDENSFPKPQKVLSECSRKKRETS--SDGNDAMERKVLWE 490

Query: 158 KTNLHYE-VAMPETSGKWQCPQKSKPDLGPPMKQLGLERWVHR 33
           +TNL  E +   E +GKW+CPQKSKP+ GPP+KQL LERWVHR
Sbjct: 491 RTNLEVEHIDAIEVTGKWRCPQKSKPNTGPPLKQLRLERWVHR 533


>ref|XP_002303367.1| predicted protein [Populus trichocarpa] gi|222840799|gb|EEE78346.1|
           predicted protein [Populus trichocarpa]
          Length = 547

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 42/103 (40%), Positives = 60/103 (58%), Gaps = 2/103 (1%)
 Frame = -1

Query: 332 ESAANGFISMKKNKSTHKNDMNCSNNSQDNNV--QYVKKMKLKSPLNEGQGGLGRKPLYE 159
           E+  NGF++ +K++    N  N  +  +   +  +  K   + S   E    + RK L E
Sbjct: 446 EAQRNGFVTTRKSRIAKPNAENSLDMHRQQQILLECPKGRGMTSRDGEKDAAVKRKVLSE 505

Query: 158 KTNLHYEVAMPETSGKWQCPQKSKPDLGPPMKQLGLERWVHRV 30
            +NL +   +  T GKW+CPQKSKP+LGPPMKQL LERWVHR+
Sbjct: 506 VSNLEHPDVIGVT-GKWKCPQKSKPNLGPPMKQLRLERWVHRL 547


>ref|XP_003611360.1| hypothetical protein MTR_5g013140 [Medicago truncatula]
           gi|355512695|gb|AES94318.1| hypothetical protein
           MTR_5g013140 [Medicago truncatula]
          Length = 395

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 40/97 (41%), Positives = 52/97 (53%)
 Frame = -1

Query: 320 NGFISMKKNKSTHKNDMNCSNNSQDNNVQYVKKMKLKSPLNEGQGGLGRKPLYEKTNLHY 141
           +GF++ +KN  T KN+ N     +   +Q            E +G   RK L E TNL  
Sbjct: 294 DGFVTTRKNSCTRKNNENSWKKPEKTLLQCSTSTGTVPLSCEKKGVAKRKALTEATNLQQ 353

Query: 140 EVAMPETSGKWQCPQKSKPDLGPPMKQLGLERWVHRV 30
              + E +GKW CPQK KPD GP +KQL LERWV +V
Sbjct: 354 SNVI-EITGKWHCPQKRKPDRGPALKQLRLERWVQKV 389


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